Aliases : evm_27.TU.AmTr_v1.0_scaffold00016.130
Description : External stimuli response.temperature.ICE-CBF cold acclimation transcriptional cascade.ICE1/2 transcription factor
Gene families : OG0000184 (Archaeplastida) Phylogenetic Tree(s): OG0000184_tree ,
OG_05_0001343 (LandPlants) Phylogenetic Tree(s): OG_05_0001343_tree ,
OG_06_0001632 (SeedPlants) Phylogenetic Tree(s): OG_06_0001632_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AMTR_s00016p00170610 | |
Cluster | HCCA: Cluster_122 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G12860 | SCRM2, ICE2 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.04 | Archaeplastida | |
AT2G16910 | AMS | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.02 | Archaeplastida | |
GSVIVT01004405001 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.03 | Archaeplastida | |
GSVIVT01008637001 | No alias | External stimuli response.temperature.ICE-CBF cold... | 0.04 | Archaeplastida | |
GSVIVT01013744001 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.03 | Archaeplastida | |
GSVIVT01013745001 | No alias | Transcription factor bHLH90 OS=Arabidopsis thaliana | 0.03 | Archaeplastida | |
GSVIVT01032998001 | No alias | External stimuli response.temperature.ICE-CBF cold... | 0.02 | Archaeplastida | |
Gb_15579 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
LOC_Os02g02820.1 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
LOC_Os03g04310.1 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
LOC_Os06g50900.1 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
MA_10435231g0010 | No alias | transcription factor (bHLH). transcription factor (ICE1|2) | 0.02 | Archaeplastida | |
MA_12807g0010 | No alias | no hits & (original description: none) | 0.05 | Archaeplastida | |
MA_448849g0010 | No alias | transcription factor (bHLH). transcription factor (ICE1|2) | 0.07 | Archaeplastida | |
Pp3c1_20960V3.1 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.03 | Archaeplastida | |
Pp3c2_16410V3.1 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.04 | Archaeplastida | |
Pp3c8_18070V3.1 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.04 | Archaeplastida | |
Solyc02g079810.3.1 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
Solyc02g091690.3.1 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
Solyc05g005300.2.1 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
Solyc05g014590.3.1 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
Zm00001e010525_P001 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
Zm00001e021526_P001 | No alias | transcription factor (bHLH). transcription factor (ICE1|2) | 0.06 | Archaeplastida | |
Zm00001e025243_P003 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
Zm00001e040732_P001 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
MF | GO:0003677 | DNA binding | IEP | Neighborhood |
MF | GO:0003678 | DNA helicase activity | IEP | Neighborhood |
MF | GO:0003887 | DNA-directed DNA polymerase activity | IEP | Neighborhood |
MF | GO:0004601 | peroxidase activity | IEP | Neighborhood |
CC | GO:0005634 | nucleus | IEP | Neighborhood |
BP | GO:0006259 | DNA metabolic process | IEP | Neighborhood |
BP | GO:0006260 | DNA replication | IEP | Neighborhood |
BP | GO:0006950 | response to stress | IEP | Neighborhood |
BP | GO:0006979 | response to oxidative stress | IEP | Neighborhood |
BP | GO:0009719 | response to endogenous stimulus | IEP | Neighborhood |
BP | GO:0009725 | response to hormone | IEP | Neighborhood |
BP | GO:0010033 | response to organic substance | IEP | Neighborhood |
MF | GO:0016209 | antioxidant activity | IEP | Neighborhood |
MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | Neighborhood |
MF | GO:0020037 | heme binding | IEP | Neighborhood |
MF | GO:0034061 | DNA polymerase activity | IEP | Neighborhood |
BP | GO:0042221 | response to chemical | IEP | Neighborhood |
CC | GO:0043226 | organelle | IEP | Neighborhood |
CC | GO:0043227 | membrane-bounded organelle | IEP | Neighborhood |
CC | GO:0043229 | intracellular organelle | IEP | Neighborhood |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Neighborhood |
CC | GO:0044424 | intracellular part | IEP | Neighborhood |
CC | GO:0044464 | cell part | IEP | Neighborhood |
MF | GO:0046906 | tetrapyrrole binding | IEP | Neighborhood |
MF | GO:0048037 | cofactor binding | IEP | Neighborhood |
BP | GO:0050896 | response to stimulus | IEP | Neighborhood |
MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Neighborhood |
MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR011598 | bHLH_dom | 359 | 401 |
No external refs found! |