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Aliases : evm_27.TU.AmTr_v1.0_scaffold00016.149
Description : Amino acid metabolism.biosynthesis.shikimate family.shikimate pathway.shikimate kinase
Gene families : OG0001857 (Archaeplastida) Phylogenetic Tree(s): OG0001857_tree ,
OG_05_0001568 (LandPlants) Phylogenetic Tree(s): OG_05_0001568_tree ,
OG_06_0009333 (SeedPlants) Phylogenetic Tree(s): OG_06_0009333_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00016p00187060 | |
| Cluster | HCCA: Cluster_153 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G26900 | ATSKL1, SKL1 | shikimate kinase like 1 | 0.03 | Archaeplastida | |
| Cre10.g436350 | No alias | Amino acid metabolism.biosynthesis.shikimate... | 0.01 | Archaeplastida | |
| GSVIVT01033029001 | No alias | Amino acid metabolism.biosynthesis.shikimate... | 0.03 | Archaeplastida | |
| LOC_Os01g01302.1 | No alias | shikimate kinase | 0.05 | Archaeplastida | |
| Pp3c6_23100V3.1 | No alias | shikimate kinase 1 | 0.02 | Archaeplastida | |
| Solyc02g094420.3.1 | No alias | shikimate kinase | 0.03 | Archaeplastida | |
| Zm00001e002928_P003 | No alias | shikimate kinase | 0.08 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0001882 | nucleoside binding | IEP | Neighborhood |
| MF | GO:0001883 | purine nucleoside binding | IEP | Neighborhood |
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0004177 | aminopeptidase activity | IEP | Neighborhood |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Neighborhood |
| MF | GO:0004556 | alpha-amylase activity | IEP | Neighborhood |
| MF | GO:0004645 | phosphorylase activity | IEP | Neighborhood |
| MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005509 | calcium ion binding | IEP | Neighborhood |
| MF | GO:0005525 | GTP binding | IEP | Neighborhood |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | Neighborhood |
| BP | GO:0006352 | DNA-templated transcription, initiation | IEP | Neighborhood |
| BP | GO:0006470 | protein dephosphorylation | IEP | Neighborhood |
| MF | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | IEP | Neighborhood |
| BP | GO:0008150 | biological_process | IEP | Neighborhood |
| BP | GO:0008152 | metabolic process | IEP | Neighborhood |
| MF | GO:0008184 | glycogen phosphorylase activity | IEP | Neighborhood |
| CC | GO:0009507 | chloroplast | IEP | Neighborhood |
| CC | GO:0009536 | plastid | IEP | Neighborhood |
| MF | GO:0009916 | alternative oxidase activity | IEP | Neighborhood |
| BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
| MF | GO:0016160 | amylase activity | IEP | Neighborhood |
| BP | GO:0016226 | iron-sulfur cluster assembly | IEP | Neighborhood |
| BP | GO:0016311 | dephosphorylation | IEP | Neighborhood |
| MF | GO:0016679 | oxidoreductase activity, acting on diphenols and related substances as donors | IEP | Neighborhood |
| MF | GO:0016682 | oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor | IEP | Neighborhood |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Neighborhood |
| MF | GO:0016987 | sigma factor activity | IEP | Neighborhood |
| MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | Neighborhood |
| CC | GO:0019898 | extrinsic component of membrane | IEP | Neighborhood |
| BP | GO:0031163 | metallo-sulfur cluster assembly | IEP | Neighborhood |
| MF | GO:0032549 | ribonucleoside binding | IEP | Neighborhood |
| MF | GO:0032550 | purine ribonucleoside binding | IEP | Neighborhood |
| MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Neighborhood |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Neighborhood |
| MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043168 | anion binding | IEP | Neighborhood |
| MF | GO:0043169 | cation binding | IEP | Neighborhood |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000623 | Shikimate_kinase/TSH1 | 138 | 274 |
| No external refs found! |