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  5. AMTR_s00016p00196760

AMTR_s00016p00196760 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00016.162

Description : RNA biosynthesis.transcriptional activation.NAC transcription factor


Gene families : OG0000008 (Archaeplastida) Phylogenetic Tree(s): OG0000008_tree ,
OG_05_0000038 (LandPlants) Phylogenetic Tree(s): OG_05_0000038_tree ,
OG_06_0000025 (SeedPlants) Phylogenetic Tree(s): OG_06_0000025_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00016p00196760
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
AT1G32510 NAC011, ANAC011 NAC domain containing protein 11 0.03 Archaeplastida
AT3G18400 anac058, NAC058 NAC domain containing protein 58 0.03 Archaeplastida
AT5G13180 VNI2, NAC083, ANAC083 NAC domain containing protein 83 0.03 Archaeplastida
AT5G46590 anac096, NAC096 NAC domain containing protein 96 0.02 Archaeplastida
GSVIVT01001264001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
GSVIVT01008839001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.04 Archaeplastida
GSVIVT01019952001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
Gb_05670 No alias transcription factor (NAC) 0.02 Archaeplastida
Gb_20626 No alias transcription factor (NAC) 0.02 Archaeplastida
LOC_Os03g42630.1 No alias transcription factor (NAC) 0.03 Archaeplastida
LOC_Os03g60080.1 No alias transcription factor (NAC) 0.02 Archaeplastida
LOC_Os05g34830.1 No alias transcription factor (NAC) 0.03 Archaeplastida
LOC_Os07g12340.1 No alias transcription factor (NAC) 0.03 Archaeplastida
LOC_Os12g29330.1 No alias transcription factor (NAC) 0.03 Archaeplastida
MA_10426531g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10431189g0020 No alias transcription factor (NAC) 0.04 Archaeplastida
MA_138461g0010 No alias transcription factor (NAC) 0.03 Archaeplastida
MA_5017g0010 No alias transcription factor (NAC) 0.02 Archaeplastida
MA_73369g0010 No alias transcription factor (NAC) 0.03 Archaeplastida
Mp4g22890.1 No alias transcription factor (NAC) 0.03 Archaeplastida
Mp6g02590.1 No alias transcription factor (NAC) 0.02 Archaeplastida
Solyc02g069960.4.1 No alias transcription factor (NAC) 0.02 Archaeplastida
Solyc05g007550.3.1 No alias transcription factor (NAC) 0.03 Archaeplastida
Solyc05g021090.4.1 No alias transcription factor (NAC) 0.03 Archaeplastida
Solyc07g045030.4.1 No alias transcription factor (NAC) 0.03 Archaeplastida
Solyc11g017470.2.1 No alias transcription factor (NAC) 0.02 Archaeplastida
Solyc12g013620.2.1 No alias transcription factor (NAC) 0.03 Archaeplastida
Solyc12g017400.3.1 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e009384_P001 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e012982_P001 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e014924_P001 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e019473_P001 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e024028_P001 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e028872_P002 No alias transcription factor (NAC) 0.04 Archaeplastida
Zm00001e030150_P001 No alias transcription factor (NAC) 0.04 Archaeplastida
Zm00001e035277_P002 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e035884_P001 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e036720_P002 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e039557_P001 No alias transcription factor (NAC) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
CC GO:0005681 spliceosomal complex IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0008430 selenium binding IEP Neighborhood
MF GO:0008519 ammonium transmembrane transporter activity IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
BP GO:0015696 ammonium transport IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
MF GO:0016881 acid-amino acid ligase activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
MF GO:1901567 fatty acid derivative binding IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR003441 NAC-dom 14 138
No external refs found!