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  5. AT1G33480

AT1G33480


Description : RING/U-box superfamily protein


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0003505 (LandPlants) Phylogenetic Tree(s): OG_05_0003505_tree ,
OG_06_0006937 (SeedPlants) Phylogenetic Tree(s): OG_06_0006937_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G33480
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00271850 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
AT1G23980 No alias RING/U-box superfamily protein 0.03 Archaeplastida
LOC_Os01g20930.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g37740.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os11g39640.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_152102g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c26_11650V3.1 No alias TOXICOS EN LEVADURA 2 0.02 Archaeplastida
Solyc06g053640.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e010029_P001 No alias ubiquitin protein ligase (XERICO) 0.04 Archaeplastida
Zm00001e018028_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e041409_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000373 Group II intron splicing IEP Neighborhood
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Neighborhood
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
MF GO:0004300 enoyl-CoA hydratase activity IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
MF GO:0004722 protein serine/threonine phosphatase activity IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
CC GO:0005778 peroxisomal membrane IEP Neighborhood
BP GO:0006473 protein acetylation IEP Neighborhood
BP GO:0006475 internal protein amino acid acetylation IEP Neighborhood
BP GO:0006760 folic acid-containing compound metabolic process IEP Neighborhood
MF GO:0008419 RNA lariat debranching enzyme activity IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
BP GO:0009648 photoperiodism IEP Neighborhood
BP GO:0009649 entrainment of circadian clock IEP Neighborhood
MF GO:0016289 CoA hydrolase activity IEP Neighborhood
BP GO:0016573 histone acetylation IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0016882 cyclo-ligase activity IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
BP GO:0018393 internal peptidyl-lysine acetylation IEP Neighborhood
BP GO:0018394 peptidyl-lysine acetylation IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
MF GO:0030272 5-formyltetrahydrofolate cyclo-ligase activity IEP Neighborhood
CC GO:0031903 microbody membrane IEP Neighborhood
BP GO:0042558 pteridine-containing compound metabolic process IEP Neighborhood
BP GO:0043153 entrainment of circadian clock by photoperiod IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
CC GO:0044438 microbody part IEP Neighborhood
CC GO:0044439 peroxisomal part IEP Neighborhood
BP GO:0046653 tetrahydrofolate metabolic process IEP Neighborhood
BP GO:0048573 photoperiodism, flowering IEP Neighborhood
BP GO:0080175 phragmoplast microtubule organization IEP Neighborhood
BP GO:0097031 obsolete mitochondrial respiratory chain complex I biogenesis IEP Neighborhood
BP GO:0097034 obsolete mitochondrial respiratory chain complex IV biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 99 142
No external refs found!