1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00016p00228960

AMTR_s00016p00228960 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00016.219

Description : Nutrient uptake.iron uptake.chelation-based strategy uptake.YSL-type Fe(III)-chelator transporter


Gene families : OG0000193 (Archaeplastida) Phylogenetic Tree(s): OG0000193_tree ,
OG_05_0000331 (LandPlants) Phylogenetic Tree(s): OG_05_0000331_tree ,
OG_06_0005472 (SeedPlants) Phylogenetic Tree(s): OG_06_0005472_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00016p00228960
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00229620 evm_27.TU.AmTr_v1... Nutrient uptake.iron uptake.chelation-based strategy... 0.03 Archaeplastida
AMTR_s00029p00090040 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.OPT... 0.02 Archaeplastida
AMTR_s00029p00090440 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.OPT... 0.02 Archaeplastida
AMTR_s00154p00064240 evm_27.TU.AmTr_v1... Probable metal-nicotianamine transporter YSL6... 0.03 Archaeplastida
AMTR_s00154p00064710 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.OPT... 0.02 Archaeplastida
Gb_27981 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.03 Archaeplastida
Gb_27988 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.04 Archaeplastida
LOC_Os04g32050.1 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.02 Archaeplastida
LOC_Os04g44300.1 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.04 Archaeplastida
LOC_Os04g44320.1 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.03 Archaeplastida
MA_10431747g0010 No alias Probable metal-nicotianamine transporter YSL12 OS=Oryza... 0.05 Archaeplastida
Mp4g10660.1 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.02 Archaeplastida
Solyc05g046370.1.1 No alias Probable metal-nicotianamine transporter YSL7... 0.03 Archaeplastida
Solyc08g083060.3.1 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.02 Archaeplastida
Zm00001e008356_P001 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003913 DNA photolyase activity IEP Neighborhood
MF GO:0004190 aspartic-type endopeptidase activity IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006855 drug transmembrane transport IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0015238 drug transmembrane transporter activity IEP Neighborhood
BP GO:0015893 drug transport IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016597 amino acid binding IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0031406 carboxylic acid binding IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
MF GO:0043177 organic acid binding IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
MF GO:0070001 aspartic-type peptidase activity IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR004813 OPT 38 657
No external refs found!