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  5. AMTR_s00016p00236400

AMTR_s00016p00236400 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00016.239

No description available


Gene families : OG0003987 (Archaeplastida) Phylogenetic Tree(s): OG0003987_tree ,
OG_05_0002909 (LandPlants) Phylogenetic Tree(s): OG_05_0002909_tree ,
OG_06_0005324 (SeedPlants) Phylogenetic Tree(s): OG_06_0005324_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00016p00236400
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00235830 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AT5G61820 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.04 Archaeplastida
Mp1g25250.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp1g25260.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Mp1g25270.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c6_7090V3.1 No alias No annotation 0.03 Archaeplastida
Smo75093 No alias No description available 0.02 Archaeplastida
Solyc06g068730.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc12g042380.2.1 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005199 structural constituent of cell wall IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009607 response to biotic stimulus IEP Neighborhood
BP GO:0009664 plant-type cell wall organization IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR011692 Stress_up-reg_Nod19 28 392
No external refs found!