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  5. Smo412903

Smo412903


Description : Cell wall.cell wall proteins.hydroxyproline-rich glycoproteins.extensins (EXTs).glycoproteins.LRR-domain extensin


Gene families : OG0000279 (Archaeplastida) Phylogenetic Tree(s): OG0000279_tree ,
OG_05_0000206 (LandPlants) Phylogenetic Tree(s): OG_05_0000206_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo412903
Cluster HCCA: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00176290 evm_27.TU.AmTr_v1... Leucine-rich repeat extensin-like protein 3... 0.05 Archaeplastida
AT1G49490 No alias Leucine-rich repeat (LRR) family protein 0.03 Archaeplastida
AT1G62440 LRX2 leucine-rich repeat/extensin 2 0.02 Archaeplastida
AT2G15880 No alias Leucine-rich repeat (LRR) family protein 0.02 Archaeplastida
AT3G19020 No alias Leucine-rich repeat (LRR) family protein 0.02 Archaeplastida
AT4G18670 No alias Leucine-rich repeat (LRR) family protein 0.04 Archaeplastida
AT4G28380 No alias Leucine-rich repeat (LRR) family protein 0.03 Archaeplastida
AT4G29240 No alias Leucine-rich repeat (LRR) family protein 0.04 Archaeplastida
GSVIVT01009442001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01020574001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
GSVIVT01031843001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
Gb_26318 No alias LRR-domain extensin 0.03 Archaeplastida
Gb_29819 No alias LRR-domain extensin 0.02 Archaeplastida
LOC_Os01g08470.1 No alias LRR-domain extensin 0.03 Archaeplastida
LOC_Os01g25460.1 No alias LRR-domain extensin 0.02 Archaeplastida
LOC_Os01g41120.1 No alias LRR-domain extensin 0.04 Archaeplastida
LOC_Os02g04540.1 No alias LRR-domain extensin 0.03 Archaeplastida
LOC_Os02g40260.1 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os03g58110.1 No alias LRR-domain extensin 0.03 Archaeplastida
LOC_Os05g08770.2 No alias LRR-domain extensin 0.05 Archaeplastida
LOC_Os05g09640.1 No alias Leucine-rich repeat extensin-like protein 4... 0.05 Archaeplastida
Pp3c4_3520V3.1 No alias Leucine-rich repeat (LRR) family protein 0.02 Archaeplastida
Solyc01g107790.2.1 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.04 Archaeplastida
Solyc07g053840.1.1 No alias LRR-domain extensin 0.03 Archaeplastida
Zm00001e005974_P001 No alias LRR-domain extensin 0.02 Archaeplastida
Zm00001e022985_P003 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e026840_P001 No alias LRR-domain extensin 0.05 Archaeplastida
Zm00001e031241_P001 No alias LRR-domain extensin 0.03 Archaeplastida
Zm00001e041184_P001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 59 92
No external refs found!