Description : DNA damage response.DNA repair mechanisms.nonhomologous end-joining repair (NHEJ).LIG4-XRCC4 ligase complex.LIG4 DNA ligase component
Gene families : OG0003002 (Archaeplastida) Phylogenetic Tree(s): OG0003002_tree ,
OG_05_0003553 (LandPlants) Phylogenetic Tree(s): OG_05_0003553_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Smo414166 | |
Cluster | HCCA: Cluster_15 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00025p00149970 | evm_27.TU.AmTr_v1... | DNA damage response.DNA repair mechanisms.nonhomologous... | 0.02 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006281 | DNA repair | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003682 | chromatin binding | IEP | Neighborhood |
MF | GO:0004379 | glycylpeptide N-tetradecanoyltransferase activity | IEP | Neighborhood |
MF | GO:0004764 | shikimate 3-dehydrogenase (NADP+) activity | IEP | Neighborhood |
CC | GO:0005681 | spliceosomal complex | IEP | Neighborhood |
BP | GO:0006464 | cellular protein modification process | IEP | Neighborhood |
BP | GO:0006468 | protein phosphorylation | IEP | Neighborhood |
BP | GO:0016310 | phosphorylation | IEP | Neighborhood |
MF | GO:0016410 | N-acyltransferase activity | IEP | Neighborhood |
MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | Neighborhood |
MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | Neighborhood |
MF | GO:0019107 | myristoyltransferase activity | IEP | Neighborhood |
MF | GO:0019207 | kinase regulator activity | IEP | Neighborhood |
BP | GO:0019538 | protein metabolic process | IEP | Neighborhood |
MF | GO:0019887 | protein kinase regulator activity | IEP | Neighborhood |
BP | GO:0036211 | protein modification process | IEP | Neighborhood |
CC | GO:0044428 | nuclear part | IEP | Neighborhood |
CC | GO:1990904 | ribonucleoprotein complex | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR012310 | DNA_ligase_ATP-dep_cent | 227 | 437 |
No external refs found! |