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  4. Sequence
  5. Smo415309

Smo415309


No description available


Gene families : OG0000132 (Archaeplastida) Phylogenetic Tree(s): OG0000132_tree ,
OG_05_0000054 (LandPlants) Phylogenetic Tree(s): OG_05_0000054_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo415309
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00242840 evm_27.TU.AmTr_v1... Protein LURP-one-related 6 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00129p00095850 evm_27.TU.AmTr_v1... Protein LURP-one-related 11 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT1G33840 No alias Protein of unknown function (DUF567) 0.04 Archaeplastida
AT1G53870 No alias Protein of unknown function (DUF567) 0.03 Archaeplastida
AT1G53890 No alias Protein of unknown function (DUF567) 0.03 Archaeplastida
AT5G20640 No alias Protein of unknown function (DUF567) 0.02 Archaeplastida
GSVIVT01019781001 No alias Protein LURP-one-related 11 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01030237001 No alias Protein LURP-one-related 15 OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_02523 No alias Protein LURP-one-related 12 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_02701 No alias Protein LURP-one-related 15 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_02702 No alias Protein LURP-one-related 15 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os01g70590.1 No alias Protein LURP-one-related 11 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os03g60210.1 No alias Protein LURP-one-related 15 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os05g06250.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os05g24650.1 No alias Protein LURP-one-related 8 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_193719g0010 No alias Protein LURP-one-related 15 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_193719g0020 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_205724g0010 No alias Protein LURP-one-related 15 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_24574g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_445275g0010 No alias Protein LURP-one-related 12 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_44963g0010 No alias Protein LURP-one-related 15 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_4774837g0010 No alias Protein LURP-one-related 8 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_571782g0010 No alias Protein LURP-one-related 6 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_96968g0010 No alias Protein LURP-one-related 12 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp2g03400.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp6g10780.1 No alias Protein LURP-one-related 15 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc08g081680.2.1 No alias Protein LURP-one-related 17 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Solyc09g014820.3.1 No alias Protein LURP-one-related 15 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc12g009130.3.1 No alias Protein LURP-one-related 6 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc12g056310.2.1 No alias Protein LURP-one-related 4 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e001629_P002 No alias Protein LURP-one-related 11 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e018739_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e028377_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e038874_P001 No alias Protein LURP-one-related 6 OS=Arabidopsis thaliana... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
MF GO:0046422 violaxanthin de-epoxidase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR007612 LOR 27 107
No external refs found!