Smo416466


Description : tRNA wybutosine-synthesizing protein 2/3/4 OS=Oryza sativa subsp. japonica


Gene families : OG0002057 (Archaeplastida) Phylogenetic Tree(s): OG0002057_tree ,
OG_05_0007197 (LandPlants) Phylogenetic Tree(s): OG_05_0007197_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo416466
Cluster HCCA: Cluster_217

Target Alias Description ECC score Gene Family Method Actions
Mp6g01150.1 No alias no description available(sp|q10az7|gpa3_orysj : 569.0) 0.02 Archaeplastida
Solyc11g007320.2.1 No alias no description available(sp|q10az7|gpa3_orysj : 618.0) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004664 prephenate dehydratase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
BP GO:0006419 alanyl-tRNA aminoacylation IEP Neighborhood
BP GO:0006766 vitamin metabolic process IEP Neighborhood
BP GO:0006767 water-soluble vitamin metabolic process IEP Neighborhood
BP GO:0006771 riboflavin metabolic process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0008373 sialyltransferase activity IEP Neighborhood
MF GO:0008375 acetylglucosaminyltransferase activity IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009110 vitamin biosynthetic process IEP Neighborhood
BP GO:0009231 riboflavin biosynthetic process IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Neighborhood
BP GO:0042726 flavin-containing compound metabolic process IEP Neighborhood
BP GO:0042727 flavin-containing compound biosynthetic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!