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  5. Smo416782

Smo416782


Description : Protein THYLAKOID ASSEMBLY 8-like, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0000306 (Archaeplastida) Phylogenetic Tree(s): OG0000306_tree ,
OG_05_0000732 (LandPlants) Phylogenetic Tree(s): OG_05_0000732_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo416782
Cluster HCCA: Cluster_191

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00175980 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g48730,... 0.03 Archaeplastida
AMTR_s00034p00130400 evm_27.TU.AmTr_v1... Protein THYLAKOID ASSEMBLY 8, chloroplastic... 0.02 Archaeplastida
AT3G53170 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Archaeplastida
GSVIVT01032162001 No alias Pentatricopeptide repeat-containing protein At3g53170... 0.02 Archaeplastida
LOC_Os07g36450.1 No alias THA8 plastidial RNA splicing factor 0.03 Archaeplastida
Smo119487 No alias Pentatricopeptide repeat-containing protein At1g19720... 0.02 Archaeplastida
Smo135826 No alias Pentatricopeptide repeat-containing protein At4g39620,... 0.03 Archaeplastida
Smo407937 No alias Protein THYLAKOID ASSEMBLY 8-like, chloroplastic... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Neighborhood
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Neighborhood
CC GO:0005811 lipid droplet IEP Neighborhood
CC GO:0005929 cilium IEP Neighborhood
BP GO:0006547 histidine metabolic process IEP Neighborhood
BP GO:0008652 cellular amino acid biosynthetic process IEP Neighborhood
BP GO:0009072 aromatic amino acid family metabolic process IEP Neighborhood
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Neighborhood
CC GO:0012511 monolayer-surrounded lipid storage body IEP Neighborhood
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Neighborhood
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Neighborhood
CC GO:0031514 motile cilium IEP Neighborhood
CC GO:0042995 cell projection IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0052803 imidazole-containing compound metabolic process IEP Neighborhood
CC GO:0120025 plasma membrane bounded cell projection IEP Neighborhood
BP GO:1901605 alpha-amino acid metabolic process IEP Neighborhood
BP GO:1901607 alpha-amino acid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 170 226
No external refs found!