1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00017p00088320

AMTR_s00017p00088320 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00017.33

Description : BTB/POZ domain-containing protein At3g50840 OS=Arabidopsis thaliana


Gene families : OG0000044 (Archaeplastida) Phylogenetic Tree(s): OG0000044_tree ,
OG_05_0000474 (LandPlants) Phylogenetic Tree(s): OG_05_0000474_tree ,
OG_06_0000452 (SeedPlants) Phylogenetic Tree(s): OG_06_0000452_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00017p00088320
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00148p00085230 evm_27.TU.AmTr_v1... BTB/POZ domain-containing protein At1g30440... 0.05 Archaeplastida
AT5G10250 DOT3 Phototropic-responsive NPH3 family protein 0.03 Archaeplastida
LOC_Os12g39380.1 No alias BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... 0.08 Archaeplastida
Pp3c25_4520V3.1 No alias Phototropic-responsive NPH3 family protein 0.03 Archaeplastida
Zm00001e006815_P001 No alias BTB/POZ domain-containing protein At5g03250... 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0007275 multicellular organism development IEP Neighborhood
BP GO:0009790 embryo development IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
InterPro domains Description Start Stop
IPR027356 NPH3_dom 187 405
No external refs found!