Smo418380

Description : External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp100 protein

Gene families : OG0000276 (Archaeplastida) Phylogenetic Tree(s): OG0000276_tree ,
OG_05_0002603 (LandPlants) Phylogenetic Tree(s): OG_05_0002603_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Smo418380
Cluster	HCCA: Cluster_215

Target	Alias	Description	ECC score	Gene Family Method
AT1G74310	ATHSP101, HOT1, HSP101	heat shock protein 101	0.04	Archaeplastida
AT2G25140	CLPB4, CLPB-M, HSP98.7	casein lytic proteinase B4	0.04	Archaeplastida
GSVIVT01007880001	No alias	External stimuli response.temperature.Hsp...	0.03	Archaeplastida
GSVIVT01011496001	No alias	External stimuli response.temperature.Hsp...	0.03	Archaeplastida
LOC_Os02g08490.1	No alias	organellar chaperone (Clp-p\|Clp-m)	0.05	Archaeplastida
LOC_Os03g31300.1	No alias	organellar chaperone (Clp-p\|Clp-m)	0.03	Archaeplastida
LOC_Os05g44340.1	No alias	cytosolic chaperone (Hsp101)	0.05	Archaeplastida
MA_8117g0010	No alias	ATP-dependent Clp protease ATP-binding subunit ClpA...	0.02	Archaeplastida
Pp3c19_4790V3.1	No alias	heat shock protein 101	0.03	Archaeplastida
Pp3c24_9060V3.1	No alias	casein lytic proteinase B3	0.02	Archaeplastida
Solyc02g088610.4.1	No alias	organellar chaperone (Clp-p\|Clp-m)	0.02	Archaeplastida
Solyc06g011400.2.1	No alias	Chaperone protein ClpB4, mitochondrial OS=Arabidopsis...	0.02	Archaeplastida
Zm00001e002026_P002	No alias	organellar chaperone (Clp-p\|Clp-m)	0.05	Archaeplastida
Zm00001e032223_P001	No alias	cytosolic chaperone (Hsp101)	0.03	Archaeplastida
Zm00001e038056_P001	No alias	organellar chaperone (Clp-p\|Clp-m)	0.03	Archaeplastida
Zm00001e040778_P001	No alias	chaperone component ClpC of chloroplast Clp-type protease complex	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006281	DNA repair	IEP	Neighborhood
BP	GO:0006352	DNA-templated transcription, initiation	IEP	Neighborhood
BP	GO:0006367	transcription initiation from RNA polymerase II promoter	IEP	Neighborhood
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	Neighborhood
MF	GO:0008237	metallopeptidase activity	IEP	Neighborhood
CC	GO:0016020	membrane	IEP	Neighborhood
BP	GO:0033554	cellular response to stress	IEP	Neighborhood
MF	GO:0051082	unfolded protein binding	IEP	Neighborhood
BP	GO:0051716	cellular response to stimulus	IEP	Neighborhood
BP	GO:0090304	nucleic acid metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR004176	Clp_N	182	230

External Links

No external refs found!