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Description : RNA biosynthesis.transcriptional activation.CPP1-like transcription factor
Gene families : OG0000498 (Archaeplastida) Phylogenetic Tree(s): OG0000498_tree ,
OG_05_0003860 (LandPlants) Phylogenetic Tree(s): OG_05_0003860_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo420712 | |
| Cluster | HCCA: Cluster_11 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT4G29000 | No alias | Tesmin/TSO1-like CXC domain-containing protein | 0.02 | Archaeplastida | |
| LOC_Os01g55580.1 | No alias | CPP1-like transcription factor | 0.02 | Archaeplastida | |
| LOC_Os02g17460.1 | No alias | CPP1-like transcription factor | 0.01 | Archaeplastida | |
| LOC_Os08g27640.1 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| LOC_Os12g41230.2 | No alias | CPP1-like transcription factor | 0.01 | Archaeplastida | |
| Pp3c17_2880V3.1 | No alias | Tesmin/TSO1-like CXC domain-containing protein | 0.01 | Archaeplastida | |
| Pp3c9_11130V3.1 | No alias | Tesmin/TSO1-like CXC domain-containing protein | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000105 | histidine biosynthetic process | IEP | Neighborhood |
| BP | GO:0006082 | organic acid metabolic process | IEP | Neighborhood |
| BP | GO:0006399 | tRNA metabolic process | IEP | Neighborhood |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Neighborhood |
| BP | GO:0006520 | cellular amino acid metabolic process | IEP | Neighborhood |
| BP | GO:0006547 | histidine metabolic process | IEP | Neighborhood |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0008652 | cellular amino acid biosynthetic process | IEP | Neighborhood |
| BP | GO:0009072 | aromatic amino acid family metabolic process | IEP | Neighborhood |
| BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | Neighborhood |
| BP | GO:0009987 | cellular process | IEP | Neighborhood |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | Neighborhood |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Neighborhood |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | Neighborhood |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Neighborhood |
| BP | GO:0043038 | amino acid activation | IEP | Neighborhood |
| BP | GO:0043039 | tRNA aminoacylation | IEP | Neighborhood |
| BP | GO:0043436 | oxoacid metabolic process | IEP | Neighborhood |
| BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
| BP | GO:0044238 | primary metabolic process | IEP | Neighborhood |
| BP | GO:0044281 | small molecule metabolic process | IEP | Neighborhood |
| BP | GO:0044283 | small molecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | Neighborhood |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
| BP | GO:0052803 | imidazole-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0071704 | organic substance metabolic process | IEP | Neighborhood |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Neighborhood |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | Neighborhood |
| BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR005172 | CRC | 179 | 214 |
| No external refs found! |