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  5. Smo420739

Smo420739


Description : RNA biosynthesis.transcriptional activation.GRF-GIF transcriptional complex.GRF transcription factor component


Gene families : OG0000341 (Archaeplastida) Phylogenetic Tree(s): OG0000341_tree ,
OG_05_0000223 (LandPlants) Phylogenetic Tree(s): OG_05_0000223_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo420739
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00189460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.GRF-GIF... 0.04 Archaeplastida
AMTR_s00065p00092420 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.GRF-GIF... 0.02 Archaeplastida
AT3G13960 GRF5, AtGRF5 growth-regulating factor 5 0.02 Archaeplastida
AT4G37740 GRF2, AtGRF2 growth-regulating factor 2 0.03 Archaeplastida
AT5G53660 AtGRF7, GRF7 growth-regulating factor 7 0.04 Archaeplastida
Gb_20400 No alias component GRF of GRF-GIF transcriptional complex 0.03 Archaeplastida
LOC_Os02g47280.1 No alias component GRF of GRF-GIF transcriptional complex 0.02 Archaeplastida
LOC_Os04g48510.1 No alias component GRF of GRF-GIF transcriptional complex 0.02 Archaeplastida
MA_18836g0010 No alias component GRF of GRF-GIF transcriptional complex 0.02 Archaeplastida
Pp3c12_3720V3.1 No alias growth-regulating factor 2 0.05 Archaeplastida
Pp3c17_1780V3.1 No alias growth-regulating factor 2 0.04 Archaeplastida
Solyc07g041640.3.1 No alias component GRF of GRF-GIF transcriptional complex 0.03 Archaeplastida
Solyc08g079800.4.1 No alias component GRF of GRF-GIF transcriptional complex 0.02 Archaeplastida
Zm00001e015436_P001 No alias component GRF of GRF-GIF transcriptional complex 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
MF GO:0004860 protein kinase inhibitor activity IEP Neighborhood
MF GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0019207 kinase regulator activity IEP Neighborhood
MF GO:0019210 kinase inhibitor activity IEP Neighborhood
MF GO:0019887 protein kinase regulator activity IEP Neighborhood
MF GO:0030291 protein serine/threonine kinase inhibitor activity IEP Neighborhood
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Neighborhood
InterPro domains Description Start Stop
IPR014977 WRC_dom 159 200
No external refs found!