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  5. Smo420760

Smo420760


Description : Cell wall.pectin.homogalacturonan.modification and degradation.pectin methylesterase


Gene families : OG0000046 (Archaeplastida) Phylogenetic Tree(s): OG0000046_tree ,
OG_05_0001525 (LandPlants) Phylogenetic Tree(s): OG_05_0001525_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo420760
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00230630 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
AMTR_s00003p00238240 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AMTR_s00003p00239700 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AMTR_s00007p00101250 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
AMTR_s00021p00242180 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.06 Archaeplastida
AMTR_s00033p00227850 evm_27.TU.AmTr_v1... Probable pectinesterase/pectinesterase inhibitor 21... 0.02 Archaeplastida
AMTR_s00038p00046180 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AMTR_s00040p00188020 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
AMTR_s00040p00233690 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AMTR_s00071p00109420 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
AMTR_s00105p00078750 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
AMTR_s00129p00031200 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AMTR_s00129p00044320 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
AMTR_s00129p00070300 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
AT1G02810 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
AT1G23200 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
AT1G53830 ATPME2, PME2 pectin methylesterase 2 0.04 Archaeplastida
AT2G43050 ATPMEPCRD Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
AT2G45220 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
AT3G10710 RHS12 root hair specific 12 0.03 Archaeplastida
AT3G43270 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Archaeplastida
AT3G49220 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.07 Archaeplastida
AT3G59010 PME61 pectin methylesterase 61 0.03 Archaeplastida
AT4G02300 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
AT4G02320 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
AT4G33220 PME44, ATPME44 pectin methylesterase 44 0.09 Archaeplastida
AT5G04960 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
AT5G04970 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
AT5G09760 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Archaeplastida
AT5G20860 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Archaeplastida
AT5G49180 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Archaeplastida
AT5G51500 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
AT5G53370 ATPMEPCRF, PMEPCRF pectin methylesterase PCR fragment F 0.02 Archaeplastida
GSVIVT01015000001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
GSVIVT01017687001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
GSVIVT01018620001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01026518001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.07 Archaeplastida
GSVIVT01027356001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01028040001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01028041001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.05 Archaeplastida
GSVIVT01028264001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
GSVIVT01028265001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01031164001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01031165001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
GSVIVT01035108001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
GSVIVT01037349001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
Gb_01422 No alias pectin methylesterase 0.04 Archaeplastida
Gb_03174 No alias pectin methylesterase 0.03 Archaeplastida
Gb_06354 No alias pectin methylesterase 0.04 Archaeplastida
Gb_06356 No alias pectin methylesterase 0.02 Archaeplastida
Gb_10522 No alias pectin methylesterase 0.03 Archaeplastida
Gb_10523 No alias pectin methylesterase 0.03 Archaeplastida
Gb_15174 No alias pectin methylesterase 0.02 Archaeplastida
Gb_25439 No alias pectin methylesterase 0.04 Archaeplastida
Gb_28162 No alias pectin methylesterase 0.03 Archaeplastida
Gb_28387 No alias pectin methylesterase 0.04 Archaeplastida
Gb_35881 No alias pectin methylesterase 0.04 Archaeplastida
Gb_36005 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os01g15039.1 No alias pectin methylesterase 0.02 Archaeplastida
LOC_Os01g21034.1 No alias pectin methylesterase 0.05 Archaeplastida
LOC_Os01g65790.1 No alias pectin methylesterase 0.06 Archaeplastida
LOC_Os02g18650.1 No alias pectin methylesterase 0.02 Archaeplastida
LOC_Os02g54190.1 No alias pectin methylesterase 0.05 Archaeplastida
LOC_Os03g18860.1 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os04g38560.1 No alias pectin methylesterase 0.04 Archaeplastida
LOC_Os04g54850.1 No alias pectin methylesterase 0.02 Archaeplastida
LOC_Os05g29790.1 No alias pectin methylesterase 0.02 Archaeplastida
LOC_Os06g09340.1 No alias pectin methylesterase 0.05 Archaeplastida
LOC_Os07g47830.1 No alias pectin methylesterase 0.04 Archaeplastida
LOC_Os07g49100.1 No alias pectin methylesterase 0.02 Archaeplastida
LOC_Os11g07090.1 No alias pectin methylesterase 0.05 Archaeplastida
LOC_Os11g08750.1 No alias pectin methylesterase 0.02 Archaeplastida
LOC_Os11g36240.1 No alias pectin methylesterase 0.02 Archaeplastida
MA_10332149g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_10372207g0010 No alias pectin methylesterase 0.04 Archaeplastida
MA_10377619g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10434786g0010 No alias No annotation 0.02 Archaeplastida
MA_10435891g0010 No alias pectin methylesterase 0.02 Archaeplastida
MA_10436266g0010 No alias Pectinesterase 3 OS=Citrus sinensis... 0.02 Archaeplastida
MA_130858g0010 No alias pectin methylesterase 0.02 Archaeplastida
MA_158002g0020 No alias pectin methylesterase 0.06 Archaeplastida
MA_177306g0010 No alias pectin methylesterase 0.02 Archaeplastida
MA_177599g0010 No alias pectin methylesterase 0.01 Archaeplastida
MA_2017g0010 No alias pectin methylesterase 0.05 Archaeplastida
MA_26888g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_354248g0010 No alias pectin methylesterase 0.03 Archaeplastida
MA_648837g0010 No alias pectin methylesterase 0.05 Archaeplastida
MA_68362g0010 No alias pectin methylesterase 0.03 Archaeplastida
MA_74624g0010 No alias pectin methylesterase 0.03 Archaeplastida
MA_84680g0010 No alias pectin methylesterase 0.02 Archaeplastida
MA_86577g0010 No alias pectin methylesterase 0.02 Archaeplastida
MA_931259g0010 No alias pectin methylesterase 0.02 Archaeplastida
MA_9367g0020 No alias pectin methylesterase 0.01 Archaeplastida
MA_96515g0010 No alias pectin methylesterase 0.02 Archaeplastida
Mp6g15150.1 No alias pectin methylesterase 0.02 Archaeplastida
Mp8g00060.1 No alias pectin methylesterase 0.03 Archaeplastida
Mp8g09330.1 No alias pectin methylesterase 0.05 Archaeplastida
Pp3c15_12280V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
Pp3c17_6440V3.1 No alias pectin methylesterase PCR fragment F 0.08 Archaeplastida
Pp3c21_11740V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.1 Archaeplastida
Pp3c21_22110V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
Pp3c26_2170V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Archaeplastida
Pp3c2_35260V3.1 No alias pectin methylesterase 3 0.02 Archaeplastida
Pp3c4_22420V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Archaeplastida
Pp3c8_3840V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.06 Archaeplastida
Smo266995 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
Solyc01g091050.4.1 No alias pectin methylesterase 0.05 Archaeplastida
Solyc01g098940.3.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc01g099960.4.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc02g014300.2.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc02g080200.4.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc02g080220.3.1 No alias pectin methylesterase 0.02 Archaeplastida
Solyc03g078100.3.1 No alias pectin methylesterase 0.04 Archaeplastida
Solyc03g083840.3.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc03g083870.4.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc03g123620.4.1 No alias pectin methylesterase 0.04 Archaeplastida
Solyc03g123630.4.1 No alias pectin methylesterase 0.02 Archaeplastida
Solyc06g009180.3.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc06g034360.2.1 No alias pectin methylesterase 0.02 Archaeplastida
Solyc07g017600.3.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc07g064170.3.1 No alias pectin methylesterase 0.02 Archaeplastida
Solyc07g064190.3.1 No alias pectin methylesterase 0.06 Archaeplastida
Solyc09g075350.4.1 No alias pectin methylesterase 0.05 Archaeplastida
Solyc12g099410.2.1 No alias pectin methylesterase 0.02 Archaeplastida
Zm00001e004056_P002 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e009863_P001 No alias pectin methylesterase 0.05 Archaeplastida
Zm00001e014142_P001 No alias pectin methylesterase 0.03 Archaeplastida
Zm00001e017514_P001 No alias pectin methylesterase 0.02 Archaeplastida
Zm00001e017515_P001 No alias pectin methylesterase 0.06 Archaeplastida
Zm00001e025576_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e026790_P001 No alias pectin methylesterase 0.02 Archaeplastida
Zm00001e034231_P001 No alias pectin methylesterase 0.05 Archaeplastida
Zm00001e035838_P001 No alias pectin methylesterase 0.04 Archaeplastida
Zm00001e041006_P001 No alias pectin methylesterase 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004860 protein kinase inhibitor activity IEP Neighborhood
MF GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0019207 kinase regulator activity IEP Neighborhood
MF GO:0019210 kinase inhibitor activity IEP Neighborhood
MF GO:0019887 protein kinase regulator activity IEP Neighborhood
MF GO:0030291 protein serine/threonine kinase inhibitor activity IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
InterPro domains Description Start Stop
IPR006501 Pectinesterase_inhib_dom 7 151
No external refs found!