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  5. Smo420931

Smo420931


Description : Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0000289 (Archaeplastida) Phylogenetic Tree(s): OG0000289_tree ,
OG_05_0000631 (LandPlants) Phylogenetic Tree(s): OG_05_0000631_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo420931
Cluster HCCA: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
AT5G02540 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Archaeplastida
AT5G50130 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Archaeplastida
Gb_09535 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.03 Archaeplastida
LOC_Os11g07922.1 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.02 Archaeplastida
LOC_Os11g07930.1 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.03 Archaeplastida
MA_125991g0010 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.03 Archaeplastida
MA_265629g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_61875g0010 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.02 Archaeplastida
Smo420551 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum 0.04 Archaeplastida
Smo421434 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.03 Archaeplastida
Smo85541 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.03 Archaeplastida
Zm00001e016903_P001 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006816 calcium ion transport IEP Neighborhood
BP GO:0006873 cellular ion homeostasis IEP Neighborhood
BP GO:0006874 cellular calcium ion homeostasis IEP Neighborhood
BP GO:0006875 cellular metal ion homeostasis IEP Neighborhood
BP GO:0007204 positive regulation of cytosolic calcium ion concentration IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
BP GO:0030003 cellular cation homeostasis IEP Neighborhood
BP GO:0048878 chemical homeostasis IEP Neighborhood
BP GO:0050801 ion homeostasis IEP Neighborhood
BP GO:0051480 regulation of cytosolic calcium ion concentration IEP Neighborhood
BP GO:0055065 metal ion homeostasis IEP Neighborhood
BP GO:0055074 calcium ion homeostasis IEP Neighborhood
BP GO:0055080 cation homeostasis IEP Neighborhood
BP GO:0055082 cellular chemical homeostasis IEP Neighborhood
BP GO:0060401 cytosolic calcium ion transport IEP Neighborhood
BP GO:0060402 calcium ion transport into cytosol IEP Neighborhood
BP GO:0070509 calcium ion import IEP Neighborhood
BP GO:0070588 calcium ion transmembrane transport IEP Neighborhood
BP GO:0070838 divalent metal ion transport IEP Neighborhood
BP GO:0072503 cellular divalent inorganic cation homeostasis IEP Neighborhood
BP GO:0072507 divalent inorganic cation homeostasis IEP Neighborhood
BP GO:0072511 divalent inorganic cation transport IEP Neighborhood
BP GO:0097553 calcium ion transmembrane import into cytosol IEP Neighborhood
BP GO:0098657 import into cell IEP Neighborhood
BP GO:0098659 inorganic cation import across plasma membrane IEP Neighborhood
BP GO:0098703 calcium ion import across plasma membrane IEP Neighborhood
BP GO:0098739 import across plasma membrane IEP Neighborhood
BP GO:0098771 inorganic ion homeostasis IEP Neighborhood
BP GO:0099587 inorganic ion import across plasma membrane IEP Neighborhood
BP GO:1902656 calcium ion import into cytosol IEP Neighborhood
InterPro domains Description Start Stop
IPR002347 SDR_fam 35 178
No external refs found!