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  5. Smo421325

Smo421325


No description available


Gene families : OG0002173 (Archaeplastida) Phylogenetic Tree(s): OG0002173_tree ,
OG_05_0008521 (LandPlants) Phylogenetic Tree(s): OG_05_0008521_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo421325
Cluster HCCA: Cluster_196

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00265580 evm_27.TU.AmTr_v1... DNA mismatch repair protein MSH3 OS=Arabidopsis thaliana 0.05 Archaeplastida
AMTR_s00018p00168540 evm_27.TU.AmTr_v1... DNA mismatch repair protein MSH1, mitochondrial... 0.03 Archaeplastida
LOC_Os04g58410.1 No alias DNA mismatch repair protein MSH3 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os10g36530.1 No alias DNA mismatch repair protein MSH3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp2g11550.1 No alias DNA mismatch repair protein MSH1, mitochondrial... 0.04 Archaeplastida
Pp3c5_20780V3.1 No alias DNA mismatch repair protein MutS, type 2 0.04 Archaeplastida
Solyc03g080010.3.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e006512_P001 No alias DNA mismatch repair protein MSH3 OS=Arabidopsis thaliana... 0.08 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0030983 mismatched DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006412 translation IEP Neighborhood
MF GO:0008312 7S RNA binding IEP Neighborhood
MF GO:0010181 FMN binding IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0070569 uridylyltransferase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR000432 DNA_mismatch_repair_MutS_C 422 485
No external refs found!