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  5. Smo422954

Smo422954


Description : Protein WHATS THIS FACTOR 1 homolog OS=Oryza sativa subsp. japonica


Gene families : OG0001104 (Archaeplastida) Phylogenetic Tree(s): OG0001104_tree ,
OG_05_0105010 (LandPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo422954
Cluster HCCA: Cluster_185

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00268210 evm_27.TU.AmTr_v1... Protein WHATS THIS FACTOR 1 homolog OS=Arabidopsis thaliana 0.05 Archaeplastida
AMTR_s00014p00229190 evm_27.TU.AmTr_v1... Protein WHATS THIS FACTOR 1 homolog OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00021p00241290 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.03 Archaeplastida
AMTR_s00033p00133210 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.05 Archaeplastida
AT4G08940 No alias Ubiquitin carboxyl-terminal hydrolase family protein 0.05 Archaeplastida
AT5G21970 No alias Ubiquitin carboxyl-terminal hydrolase family protein 0.04 Archaeplastida
AT5G62990 emb1692 Ubiquitin carboxyl-terminal hydrolase family protein 0.03 Archaeplastida
Gb_07993 No alias WTF1 plastidial RNA basal splicing factor 0.02 Archaeplastida
Gb_34809 No alias WTF1 plastidial RNA basal splicing factor 0.03 Archaeplastida
LOC_Os05g49610.1 No alias WTF1 plastidial RNA basal splicing factor 0.03 Archaeplastida
LOC_Os09g29760.1 No alias Protein WHATS THIS FACTOR 1 OS=Zea mays... 0.02 Archaeplastida
MA_423098g0010 No alias WTF1 plastidial RNA basal splicing factor 0.03 Archaeplastida
Pp3c26_560V3.1 No alias Ubiquitin carboxyl-terminal hydrolase family protein 0.02 Archaeplastida
Smo409264 No alias Protein WHATS THIS FACTOR 1 OS=Zea mays 0.05 Archaeplastida
Smo98802 No alias Protein WHATS THIS FACTOR 1 homolog OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc01g079430.2.1 No alias Protein WHATS THIS FACTOR 1 homolog OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e000591_P002 No alias Protein WHATS THIS FACTOR 1 homolog OS=Oryza sativa... 0.04 Archaeplastida
Zm00001e011811_P001 No alias Protein WHATS THIS FACTOR 1 OS=Zea mays... 0.03 Archaeplastida
Zm00001e026570_P001 No alias WTF1 plastidial RNA basal splicing factor 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0043167 ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR021099 PORR_domain 17 333
No external refs found!