AMTR_s00017p00232330 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00017.187

Description : RNA biosynthesis.transcriptional activation.AP2/ERF superfamily.ERF-type transcription factor

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000007 (SeedPlants) Phylogenetic Tree(s): OG_06_0000007_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00017p00232330
Cluster	HCCA: Cluster_68

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00240320	evm_27.TU.AmTr_v1...	Ethylene-responsive transcription factor FZP OS=Oryza...	0.03	Archaeplastida
AT1G22190	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT1G43160	RAP2.6	related to AP2 6	0.03	Archaeplastida
AT1G71520	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT1G74930	ORA47	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT2G44840	ATERF13, ERF13, EREBP	ethylene-responsive element binding factor 13	0.04	Archaeplastida
AT3G23240	ERF1, ATERF1	ethylene response factor 1	0.03	Archaeplastida
AT4G17500	ERF-1, ATERF-1	ethylene responsive element binding factor 1	0.03	Archaeplastida
AT4G34410	RRTF1	redox responsive transcription factor 1	0.02	Archaeplastida
Gb_01210	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_01214	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_01216	No alias	transcription factor (DREB)	0.05	Archaeplastida
Gb_01217	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_01221	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_07474	No alias	transcription factor (ERF)	0.05	Archaeplastida
Gb_07476	No alias	transcription factor (ERF)	0.04	Archaeplastida
Gb_17207	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_17208	No alias	transcription factor (DREB). C2H2 zinc finger...	0.04	Archaeplastida
Gb_17210	No alias	transcription factor (DREB). C2H2 zinc finger...	0.05	Archaeplastida
Gb_17211	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_17212	No alias	transcription factor (DREB)	0.05	Archaeplastida
Gb_23870	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_26662	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_32995	No alias	Ethylene-responsive transcription factor ERF016...	0.02	Archaeplastida
Gb_35474	No alias	transcription factor (ERF)	0.04	Archaeplastida
Gb_36010	No alias	transcription factor (ERF)	0.05	Archaeplastida
Gb_41020	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os01g07120.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os01g54890.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os02g38090.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
LOC_Os05g49010.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os07g22730.1	No alias	no hits & (original description: none)	0.02	Archaeplastida
LOC_Os08g36920.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
MA_116185g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_137148g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_16778g0010	No alias	transcription factor (DREB)	0.04	Archaeplastida
MA_40048g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_4182g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_81029g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_83118g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_928517g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_96512g0020	No alias	Ethylene-responsive transcription factor ERF071...	0.02	Archaeplastida
Mp5g06970.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Mp7g13760.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Pp3c4_31920V3.1	No alias	ethylene responsive element binding factor 1	0.02	Archaeplastida
Pp3c7_1240V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Solyc01g090370.3.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc02g077370.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc03g093550.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc04g071770.3.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc06g051840.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc10g076380.2.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
Solyc10g078610.1.1	No alias	transcription factor (ERF). transcription factor (ERN1)	0.03	Archaeplastida
Solyc12g042210.2.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e000608_P002	No alias	Ethylene-responsive transcription factor ERF073...	0.03	Archaeplastida
Zm00001e007352_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e010860_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e014659_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e017516_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e019159_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e021282_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e023224_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e026192_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e033072_P001	No alias	transcription factor (ERF). transcription factor (ERN1)	0.02	Archaeplastida
Zm00001e035811_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e035837_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e041539_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0008131	primary amine oxidase activity	IEP	Neighborhood
MF	GO:0008168	methyltransferase activity	IEP	Neighborhood
BP	GO:0009308	amine metabolic process	IEP	Neighborhood
MF	GO:0016638	oxidoreductase activity, acting on the CH-NH2 group of donors	IEP	Neighborhood
MF	GO:0016641	oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor	IEP	Neighborhood
MF	GO:0048038	quinone binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	181	230

External Links

No external refs found!

AMTR_s00017p00232330 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation