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Description : Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidopsis thaliana
Gene families : OG0000000 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0034109 (LandPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo424099 | |
| Cluster | HCCA: Cluster_173 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00057p00151990 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | Archaeplastida | |
| AMTR_s00066p00062930 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g49170,... | 0.02 | Archaeplastida | |
| AMTR_s00071p00184210 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | Archaeplastida | |
| AT3G22150 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | Archaeplastida | |
| AT3G63370 | OTP86 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Archaeplastida | |
| AT5G55740 | CRR21 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | Archaeplastida | |
| AT5G66520 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Archaeplastida | |
| Cpa|evm.model.tig00001038.5 | No alias | No description available | 0.01 | Archaeplastida | |
| GSVIVT01023818001 | No alias | Pentatricopeptide repeat-containing protein At4g21065... | 0.01 | Archaeplastida | |
| GSVIVT01031251001 | No alias | Pentatricopeptide repeat-containing protein At5g48910... | 0.02 | Archaeplastida | |
| GSVIVT01033190001 | No alias | Pentatricopeptide repeat-containing protein At5g66520... | 0.02 | Archaeplastida | |
| LOC_Os01g10800.1 | No alias | Pentatricopeptide repeat-containing protein DOT4,... | 0.03 | Archaeplastida | |
| LOC_Os02g50280.1 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.02 | Archaeplastida | |
| LOC_Os07g20420.1 | No alias | Pentatricopeptide repeat-containing protein At3g26782,... | 0.02 | Archaeplastida | |
| LOC_Os11g29230.1 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.02 | Archaeplastida | |
| MA_100287g0010 | No alias | Pentatricopeptide repeat-containing protein At3g12770... | 0.03 | Archaeplastida | |
| MA_124907g0010 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.01 | Archaeplastida | |
| MA_653417g0010 | No alias | Pentatricopeptide repeat-containing protein At3g57430,... | 0.02 | Archaeplastida | |
| Pp3c22_1710V3.1 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Archaeplastida | |
| Solyc01g007850.2.1 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | Archaeplastida | |
| Solyc01g095690.2.1 | No alias | Pentatricopeptide repeat-containing protein At4g01030,... | 0.02 | Archaeplastida | |
| Solyc08g013850.1.1 | No alias | RNA editing factor (CRR21) | 0.03 | Archaeplastida | |
| Solyc08g076150.4.1 | No alias | Pentatricopeptide repeat-containing protein At1g31920... | 0.02 | Archaeplastida | |
| Solyc11g017370.3.1 | No alias | RNA editing factor (AEF1) | 0.03 | Archaeplastida | |
| Zm00001e021453_P001 | No alias | Pentatricopeptide repeat-containing protein At5g06540... | 0.01 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003747 | translation release factor activity | IEP | Neighborhood |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | Neighborhood |
| BP | GO:0006721 | terpenoid metabolic process | IEP | Neighborhood |
| BP | GO:0006812 | cation transport | IEP | Neighborhood |
| MF | GO:0008079 | translation termination factor activity | IEP | Neighborhood |
| MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
| BP | GO:0009439 | cyanate metabolic process | IEP | Neighborhood |
| MF | GO:0010181 | FMN binding | IEP | Neighborhood |
| BP | GO:0016114 | terpenoid biosynthetic process | IEP | Neighborhood |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | Neighborhood |
| MF | GO:0016853 | isomerase activity | IEP | Neighborhood |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043169 | cation binding | IEP | Neighborhood |
| MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
| MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 470 | 502 |
| No external refs found! |