AMTR_s00017p00248090 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00017.240

Description : F-box/FBD/LRR-repeat protein At1g13570 OS=Arabidopsis thaliana


Gene families : OG0000360 (Archaeplastida) Phylogenetic Tree(s): OG0000360_tree ,
OG_05_0000186 (LandPlants) Phylogenetic Tree(s): OG_05_0000186_tree ,
OG_06_0000535 (SeedPlants) Phylogenetic Tree(s): OG_06_0000535_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00017p00248090
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00248550 evm_27.TU.AmTr_v1... F-box/FBD/LRR-repeat protein At1g13570 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00040p00128880 evm_27.TU.AmTr_v1... F-box/FBD/LRR-repeat protein At1g13570 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00129p00054950 evm_27.TU.AmTr_v1... F-box/FBD/LRR-repeat protein At1g13570 OS=Arabidopsis thaliana 0.04 Archaeplastida
MA_9686g0010 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004190 aspartic-type endopeptidase activity IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
MF GO:0070001 aspartic-type peptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
InterPro domains Description Start Stop
IPR001810 F-box_dom 7 43
No external refs found!