Aliases : evm_27.TU.AmTr_v1.0_scaffold00017.283
Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.F-BOX substrate adaptor components.SKP component
Gene families : OG0003927 (Archaeplastida) Phylogenetic Tree(s): OG0003927_tree ,
OG_05_0003362 (LandPlants) Phylogenetic Tree(s): OG_05_0003362_tree ,
OG_06_0005287 (SeedPlants) Phylogenetic Tree(s): OG_06_0005287_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AMTR_s00017p00256710 | |
Cluster | HCCA: Cluster_254 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G21410 | SKP2A | F-box/RNI-like superfamily protein | 0.03 | Archaeplastida | |
Zm00001e019063_P001 | No alias | component F-box of SCF E3 ubiquitin ligase complex | 0.02 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000062 | fatty-acyl-CoA binding | IEP | Neighborhood |
MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Neighborhood |
MF | GO:0005506 | iron ion binding | IEP | Neighborhood |
CC | GO:0005576 | extracellular region | IEP | Neighborhood |
CC | GO:0005681 | spliceosomal complex | IEP | Neighborhood |
BP | GO:0008150 | biological_process | IEP | Neighborhood |
MF | GO:0009055 | electron transfer activity | IEP | Neighborhood |
BP | GO:0009116 | nucleoside metabolic process | IEP | Neighborhood |
MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | Neighborhood |
MF | GO:0016757 | transferase activity, transferring glycosyl groups | IEP | Neighborhood |
MF | GO:0016758 | transferase activity, transferring hexosyl groups | IEP | Neighborhood |
MF | GO:0016762 | xyloglucan:xyloglucosyl transferase activity | IEP | Neighborhood |
MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Neighborhood |
MF | GO:0016833 | oxo-acid-lyase activity | IEP | Neighborhood |
MF | GO:0020037 | heme binding | IEP | Neighborhood |
MF | GO:0033218 | amide binding | IEP | Neighborhood |
MF | GO:0046906 | tetrapyrrole binding | IEP | Neighborhood |
MF | GO:0048037 | cofactor binding | IEP | Neighborhood |
CC | GO:0048046 | apoplast | IEP | Neighborhood |
MF | GO:1901567 | fatty acid derivative binding | IEP | Neighborhood |
BP | GO:1901657 | glycosyl compound metabolic process | IEP | Neighborhood |
MF | GO:1901681 | sulfur compound binding | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001810 | F-box_dom | 108 | 142 |
No external refs found! |