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  5. AMTR_s00018p00024220

AMTR_s00018p00024220 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00018.4

Description : Protein modification.protein folding and quality control.NAC ribosome-associated chaperone complex.alpha subunit


Gene families : OG0001568 (Archaeplastida) Phylogenetic Tree(s): OG0001568_tree ,
OG_05_0001521 (LandPlants) Phylogenetic Tree(s): OG_05_0001521_tree ,
OG_06_0001353 (SeedPlants) Phylogenetic Tree(s): OG_06_0001353_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00018p00024220
Cluster HCCA: Cluster_265

Target Alias Description ECC score Gene Family Method Actions
AT4G10480 No alias Nascent polypeptide-associated complex (NAC), alpha... 0.03 Archaeplastida
Cre15.g635600 No alias Protein modification.protein folding and quality... 0.05 Archaeplastida
Gb_25983 No alias subunit alpha of NAC ribosome-associated chaperone complex 0.03 Archaeplastida
Mp5g02250.1 No alias subunit alpha of NAC ribosome-associated chaperone complex 0.02 Archaeplastida
Pp3c20_6810V3.1 No alias Nascent polypeptide-associated complex (NAC), alpha... 0.02 Archaeplastida
Solyc03g080160.3.1 No alias subunit alpha of NAC ribosome-associated chaperone complex 0.03 Archaeplastida
Zm00001e001675_P002 No alias subunit alpha of NAC ribosome-associated chaperone complex 0.04 Archaeplastida
Zm00001e021972_P001 No alias subunit alpha of NAC ribosome-associated chaperone complex 0.03 Archaeplastida
Zm00001e038200_P001 No alias No annotation 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
MF GO:0008026 ATP-dependent helicase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
MF GO:0070035 purine NTP-dependent helicase activity IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002715 Nas_poly-pep-assoc_cplx_dom 111 140
No external refs found!