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  5. AMTR_s00018p00070180

AMTR_s00018p00070180 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00018.24

Description : RNA biosynthesis.transcriptional activation.NAC transcription factor


Gene families : OG0000008 (Archaeplastida) Phylogenetic Tree(s): OG0000008_tree ,
OG_05_0000015 (LandPlants) Phylogenetic Tree(s): OG_05_0000015_tree ,
OG_06_0000234 (SeedPlants) Phylogenetic Tree(s): OG_06_0000234_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00018p00070180
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00207380 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.04 Archaeplastida
AT1G32510 NAC011, ANAC011 NAC domain containing protein 11 0.03 Archaeplastida
AT1G76420 ANAC031, NAC368, CUC3 NAC (No Apical Meristem) domain transcriptional... 0.03 Archaeplastida
AT2G43000 NAC042, anac042 NAC domain containing protein 42 0.02 Archaeplastida
AT3G12977 No alias NAC (No Apical Meristem) domain transcriptional... 0.04 Archaeplastida
AT3G15170 ANAC054, ATNAC1, CUC1 NAC (No Apical Meristem) domain transcriptional... 0.02 Archaeplastida
AT3G18400 anac058, NAC058 NAC domain containing protein 58 0.03 Archaeplastida
AT4G17980 anac071, NAC071 NAC domain containing protein 71 0.04 Archaeplastida
AT5G24590 ANAC091, TIP No description available 0.03 Archaeplastida
AT5G46590 anac096, NAC096 NAC domain containing protein 96 0.04 Archaeplastida
Gb_13957 No alias transcription factor (NAC) 0.02 Archaeplastida
Gb_27819 No alias transcription factor (KNOX). transcription factor (NAC) 0.01 Archaeplastida
LOC_Os01g01430.1 No alias transcription factor (NAC) 0.01 Archaeplastida
LOC_Os03g60080.1 No alias transcription factor (NAC) 0.03 Archaeplastida
LOC_Os12g41680.1 No alias transcription factor (NAC) 0.02 Archaeplastida
MA_103386g0010 No alias transcription factor (NAC) 0.02 Archaeplastida
MA_33912g0010 No alias transcription factor (NAC) 0.02 Archaeplastida
Solyc10g055760.2.1 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e003559_P003 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e007411_P001 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e007905_P001 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e011786_P001 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e012982_P001 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e023108_P001 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e024549_P002 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e029404_P001 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e031694_P001 No alias No annotation 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0019829 cation-transporting ATPase activity IEP Neighborhood
MF GO:0022853 active ion transmembrane transporter activity IEP Neighborhood
MF GO:0036442 proton-exporting ATPase activity IEP Neighborhood
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Neighborhood
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Neighborhood
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR003441 NAC-dom 9 140
No external refs found!