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  5. Smo429785

Smo429785


Description : 4-coumarate--CoA ligase-like 1 OS=Oryza sativa subsp. japonica


Gene families : OG0000179 (Archaeplastida) Phylogenetic Tree(s): OG0000179_tree ,
OG_05_0000459 (LandPlants) Phylogenetic Tree(s): OG_05_0000459_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo429785
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00050p00171700 evm_27.TU.AmTr_v1... 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_40573 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.06 Archaeplastida
MA_103893g0010 No alias 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Mp1g05060.1 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Pp3c21_15460V3.1 No alias 4-coumarate:CoA ligase 3 0.02 Archaeplastida
Pp3c22_15350V3.1 No alias 4-coumarate:CoA ligase 3 0.02 Archaeplastida
Solyc07g008360.2.1 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.03 Archaeplastida
Zm00001e002498_P003 No alias 4-coumarate--CoA ligase-like 3 OS=Oryza sativa subsp.... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR025110 AMP-bd_C 453 511
No external refs found!