Smo430253

Description : Protein biosynthesis.organelle translation machineries.translation termination.PrfB-type peptide chain release factor

Gene families : OG0001906 (Archaeplastida) Phylogenetic Tree(s): OG0001906_tree ,
OG_05_0003339 (LandPlants) Phylogenetic Tree(s): OG_05_0003339_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Smo430253
Cluster	HCCA: Cluster_220

Target	Alias	Description	ECC score	Gene Family Method	Actions
AMTR_s00066p00184560	evm_27.TU.AmTr_v1...	Protein biosynthesis.organelle translation...	0.02	Archaeplastida
Cre01.g010864	No alias	Protein biosynthesis.organelle translation...	0.01	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0006415	translational termination	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022411	cellular component disassembly	None	Extended
BP	GO:0032984	protein-containing complex disassembly	None	Extended
BP	GO:0043624	cellular protein complex disassembly	None	Extended
BP	GO:0043933	protein-containing complex subunit organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	Neighborhood
MF	GO:0004000	adenosine deaminase activity	IEP	Neighborhood
CC	GO:0005643	nuclear pore	IEP	Neighborhood
BP	GO:0006352	DNA-templated transcription, initiation	IEP	Neighborhood
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	Neighborhood
MF	GO:0016814	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines	IEP	Neighborhood
MF	GO:0016853	isomerase activity	IEP	Neighborhood
MF	GO:0016859	cis-trans isomerase activity	IEP	Neighborhood
MF	GO:0019239	deaminase activity	IEP	Neighborhood
CC	GO:0030117	membrane coat	IEP	Neighborhood
CC	GO:0030120	vesicle coat	IEP	Neighborhood
CC	GO:0030127	COPII vesicle coat	IEP	Neighborhood
CC	GO:0044422	organelle part	IEP	Neighborhood
CC	GO:0044433	cytoplasmic vesicle part	IEP	Neighborhood
CC	GO:0044446	intracellular organelle part	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR005139	PCRF	117	168

External Links

No external refs found!