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Description : Probable RNA helicase SDE3 OS=Arabidopsis thaliana
Gene families : OG0002518 (Archaeplastida) Phylogenetic Tree(s): OG0002518_tree ,
OG_05_0003674 (LandPlants) Phylogenetic Tree(s): OG_05_0003674_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo430895 | |
| Cluster | HCCA: Cluster_123 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Gb_16211 | No alias | Probable RNA helicase SDE3 OS=Arabidopsis thaliana... | 0.02 | Archaeplastida | |
| Gb_16213 | No alias | Probable RNA helicase SDE3 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
| Gb_16361 | No alias | Probable RNA helicase SDE3 OS=Arabidopsis thaliana... | 0.02 | Archaeplastida | |
| Gb_16363 | No alias | Probable RNA helicase SDE3 OS=Arabidopsis thaliana... | 0.02 | Archaeplastida | |
| Gb_18116 | No alias | Probable RNA helicase SDE3 OS=Arabidopsis thaliana... | 0.02 | Archaeplastida | |
| LOC_Os03g06440.2 | No alias | Probable RNA helicase SDE3 OS=Arabidopsis thaliana... | 0.02 | Archaeplastida | |
| Solyc06g054050.3.1 | No alias | Probable RNA helicase SDE3 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003824 | catalytic activity | IEP | Neighborhood |
| MF | GO:0003849 | 3-deoxy-7-phosphoheptulonate synthase activity | IEP | Neighborhood |
| MF | GO:0003860 | 3-hydroxyisobutyryl-CoA hydrolase activity | IEP | Neighborhood |
| MF | GO:0004014 | adenosylmethionine decarboxylase activity | IEP | Neighborhood |
| MF | GO:0004478 | methionine adenosyltransferase activity | IEP | Neighborhood |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Neighborhood |
| MF | GO:0005216 | ion channel activity | IEP | Neighborhood |
| BP | GO:0006508 | proteolysis | IEP | Neighborhood |
| BP | GO:0006810 | transport | IEP | Neighborhood |
| BP | GO:0008150 | biological_process | IEP | Neighborhood |
| BP | GO:0010215 | cellulose microfibril organization | IEP | Neighborhood |
| MF | GO:0015267 | channel activity | IEP | Neighborhood |
| MF | GO:0016289 | CoA hydrolase activity | IEP | Neighborhood |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | Neighborhood |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | Neighborhood |
| MF | GO:0016787 | hydrolase activity | IEP | Neighborhood |
| MF | GO:0016790 | thiolester hydrolase activity | IEP | Neighborhood |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Neighborhood |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0022838 | substrate-specific channel activity | IEP | Neighborhood |
| BP | GO:0030198 | extracellular matrix organization | IEP | Neighborhood |
| BP | GO:0043062 | extracellular structure organization | IEP | Neighborhood |
| BP | GO:0051179 | localization | IEP | Neighborhood |
| BP | GO:0051234 | establishment of localization | IEP | Neighborhood |
| BP | GO:0055085 | transmembrane transport | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |