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  5. Smo437359

Smo437359


Description : Cell cycle.interphase.DNA replication.initiation.replicated DNA checkpoint protein (TopBP1)


Gene families : OG0002868 (Archaeplastida) Phylogenetic Tree(s): OG0002868_tree ,
OG_05_0003015 (LandPlants) Phylogenetic Tree(s): OG_05_0003015_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo437359
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00057240 evm_27.TU.AmTr_v1... Cell cycle.interphase.DNA... 0.05 Archaeplastida
LOC_Os03g19190.1 No alias cell cycle replicated DNA checkpoint protein (TopBP1) 0.02 Archaeplastida
MA_100135g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp5g23040.1 No alias cell cycle replicated DNA checkpoint protein (TopBP1) 0.04 Archaeplastida
Zm00001e001412_P002 No alias cell cycle replicated DNA checkpoint protein (TopBP1) 0.04 Archaeplastida
Zm00001e035929_P001 No alias cell cycle replicated DNA checkpoint protein (TopBP1) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004017 adenylate kinase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
CC GO:0005856 cytoskeleton IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0019205 nucleobase-containing compound kinase activity IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
MF GO:0050145 nucleoside monophosphate kinase activity IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 764 811
No external refs found!