AMTR_s00018p00203080 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00018.123

Description : Vesicle trafficking.endomembrane trafficking.vacuolar sorting.RMR vacuolar sorting receptor

Gene families : OG0001501 (Archaeplastida) Phylogenetic Tree(s): OG0001501_tree ,
OG_05_0001253 (LandPlants) Phylogenetic Tree(s): OG_05_0001253_tree ,
OG_06_0013773 (SeedPlants) Phylogenetic Tree(s): OG_06_0013773_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00018p00203080
Cluster	HCCA: Cluster_232

Target	Alias	Description	ECC score	Gene Family Method	Actions
Pp3c1_34410V3.1	No alias	Protease-associated (PA) RING/U-box zinc finger family protein	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003137	PA_domain	7	71
IPR001841	Znf_RING	157	201

External Links

No external refs found!