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  5. AMTR_s00018p00209550

AMTR_s00018p00209550 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00018.130

No description available


Gene families : OG0006697 (Archaeplastida) Phylogenetic Tree(s): OG0006697_tree ,
OG_05_0008887 (LandPlants) Phylogenetic Tree(s): OG_05_0008887_tree ,
OG_06_0011967 (SeedPlants) Phylogenetic Tree(s): OG_06_0011967_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00018p00209550
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
AT4G38640 No alias Plasma-membrane choline transporter family protein 0.02 Archaeplastida
Cre09.g390467 No alias No description available 0.01 Archaeplastida
Gb_28537 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR007603 Choline_transptr-like 248 559
No external refs found!