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  5. AMTR_s00018p00216050

AMTR_s00018p00216050 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00018.135

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase


Gene families : OG0011503 (Archaeplastida) Phylogenetic Tree(s): OG0011503_tree ,
OG_05_0011390 (LandPlants) Phylogenetic Tree(s): OG_05_0011390_tree ,
OG_06_0011439 (SeedPlants) Phylogenetic Tree(s): OG_06_0011439_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00018p00216050

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00627p00010530 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s04543p00000270 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016832 aldehyde-lyase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 130 174
No external refs found!