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Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.UTP10 assembly factor
Gene families : OG0003059 (Archaeplastida) Phylogenetic Tree(s): OG0003059_tree ,
OG_05_0005928 (LandPlants) Phylogenetic Tree(s): OG_05_0005928_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo438493 | |
| Cluster | HCCA: Cluster_75 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G06530 | No alias | ARM repeat superfamily protein | 0.11 | Archaeplastida | |
| Cpa|evm.model.tig00022075.101 | No alias | Uncharacterized protein At3g06530 OS=Arabidopsis thaliana | 0.01 | Archaeplastida | |
| Cre12.g548000 | No alias | Uncharacterized protein At3g06530 OS=Arabidopsis thaliana | 0.02 | Archaeplastida | |
| GSVIVT01013976001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.07 | Archaeplastida | |
| LOC_Os04g46310.1 | No alias | SSU processome assembly factor (UTP10) | 0.08 | Archaeplastida | |
| MA_10133755g0010 | No alias | no hits & (original description: none) | 0.06 | Archaeplastida | |
| MA_10431774g0010 | No alias | No annotation | 0.05 | Archaeplastida | |
| MA_10431891g0010 | No alias | Uncharacterized protein At3g06530 OS=Arabidopsis... | 0.03 | Archaeplastida | |
| MA_735g0010 | No alias | Uncharacterized protein At3g06530 OS=Arabidopsis... | 0.02 | Archaeplastida | |
| Mp1g06160.1 | No alias | SSU processome assembly factor (UTP10) | 0.1 | Archaeplastida | |
| Pp3c3_10580V3.1 | No alias | ARM repeat superfamily protein | 0.1 | Archaeplastida | |
| Solyc03g093480.3.1 | No alias | SSU processome assembly factor (UTP10) | 0.08 | Archaeplastida | |
| Zm00001e016831_P001 | No alias | SSU processome assembly factor (UTP10) | 0.12 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003723 | RNA binding | IEP | Neighborhood |
| MF | GO:0003843 | 1,3-beta-D-glucan synthase activity | IEP | Neighborhood |
| MF | GO:0004386 | helicase activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005515 | protein binding | IEP | Neighborhood |
| MF | GO:0005524 | ATP binding | IEP | Neighborhood |
| CC | GO:0005634 | nucleus | IEP | Neighborhood |
| CC | GO:0005643 | nuclear pore | IEP | Neighborhood |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006188 | IMP biosynthetic process | IEP | Neighborhood |
| BP | GO:0006189 | 'de novo' IMP biosynthetic process | IEP | Neighborhood |
| BP | GO:0006364 | rRNA processing | IEP | Neighborhood |
| BP | GO:0006396 | RNA processing | IEP | Neighborhood |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
| MF | GO:0008144 | drug binding | IEP | Neighborhood |
| BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
| BP | GO:0016072 | rRNA metabolic process | IEP | Neighborhood |
| MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
| CC | GO:0031248 | protein acetyltransferase complex | IEP | Neighborhood |
| CC | GO:0031414 | N-terminal protein acetyltransferase complex | IEP | Neighborhood |
| CC | GO:0031417 | |||
| IEP | Neighborhood | |||
| MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
| BP | GO:0034470 | ncRNA processing | IEP | Neighborhood |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Neighborhood |
| MF | GO:0035251 | UDP-glucosyltransferase activity | IEP | Neighborhood |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
| MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043168 | anion binding | IEP | Neighborhood |
| CC | GO:0043226 | organelle | IEP | Neighborhood |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0043229 | intracellular organelle | IEP | Neighborhood |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Neighborhood |
| BP | GO:0043248 | proteasome assembly | IEP | Neighborhood |
| CC | GO:0044424 | intracellular part | IEP | Neighborhood |
| CC | GO:0044464 | cell part | IEP | Neighborhood |
| BP | GO:0046040 | IMP metabolic process | IEP | Neighborhood |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
| MF | GO:0046527 | glucosyltransferase activity | IEP | Neighborhood |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| CC | GO:1902493 | acetyltransferase complex | IEP | Neighborhood |
| CC | GO:1990234 | transferase complex | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR012954 | BP28_C_dom | 1698 | 1856 |
| No external refs found! |