AT1G34150


Description : Pseudouridine synthase family protein


Gene families : OG0007121 (Archaeplastida) Phylogenetic Tree(s): OG0007121_tree ,
OG_05_0008995 (LandPlants) Phylogenetic Tree(s): OG_05_0008995_tree ,
OG_06_0008368 (SeedPlants) Phylogenetic Tree(s): OG_06_0008368_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G34150
Cluster HCCA: Cluster_145


Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006730 one-carbon metabolic process RCA Interproscan
MF GO:0009982 pseudouridine synthase activity ISS Interproscan
MF GO:0009982 pseudouridine synthase activity TAS Interproscan
Type GO Term Name Evidence Source
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006402 mRNA catabolic process IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006595 polyamine metabolic process IEP Neighborhood
BP GO:0006598 polyamine catabolic process IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009314 response to radiation IEP Neighborhood
BP GO:0009416 response to light stimulus IEP Neighborhood
BP GO:0009648 photoperiodism IEP Neighborhood
BP GO:0010262 somatic embryogenesis IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
CC GO:0016602 CCAAT-binding factor complex IEP Neighborhood
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Neighborhood
MF GO:0016647 oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0034655 nucleobase-containing compound catabolic process IEP Neighborhood
BP GO:0040034 regulation of development, heterochronic IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
MF GO:0046592 polyamine oxidase activity IEP Neighborhood
BP GO:0046777 protein autophosphorylation IEP Neighborhood
BP GO:0048506 regulation of timing of meristematic phase transition IEP Neighborhood
BP GO:0048510 regulation of timing of transition from vegetative to reproductive phase IEP Neighborhood
BP GO:0048571 long-day photoperiodism IEP Neighborhood
BP GO:0048573 photoperiodism, flowering IEP Neighborhood
BP GO:0048574 long-day photoperiodism, flowering IEP Neighborhood
BP GO:0048578 positive regulation of long-day photoperiodism, flowering IEP Neighborhood
BP GO:0048586 regulation of long-day photoperiodism, flowering IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0055046 microgametogenesis IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
BP GO:2000028 regulation of photoperiodism, flowering IEP Neighborhood
BP GO:2000243 positive regulation of reproductive process IEP Neighborhood
InterPro domains Description Start Stop
IPR020097 PsdUridine_synth_TruA_a/b_dom 240 350
No external refs found!