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  4. Sequence
  5. Smo438884

Smo438884


Description : Uncharacterized membrane protein At1g16860 OS=Arabidopsis thaliana


Gene families : OG0001444 (Archaeplastida) Phylogenetic Tree(s): OG0001444_tree ,
OG_05_0001058 (LandPlants) Phylogenetic Tree(s): OG_05_0001058_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo438884
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00249170 evm_27.TU.AmTr_v1... Uncharacterized membrane protein At1g16860... 0.04 Archaeplastida
AMTR_s00025p00154670 evm_27.TU.AmTr_v1... Uncharacterized membrane protein At1g16860... 0.05 Archaeplastida
AMTR_s00074p00143470 evm_27.TU.AmTr_v1... Uncharacterized membrane protein At1g16860... 0.03 Archaeplastida
AMTR_s02886p00004880 evm_27.TU.AmTr_v1... Uncharacterized membrane protein At1g16860... 0.04 Archaeplastida
AT1G16860 No alias Ubiquitin-specific protease family C19-related protein 0.02 Archaeplastida
Gb_22203 No alias SHOU4-type cellulose synthase CSC-interactive protein 0.02 Archaeplastida
Gb_33458 No alias SHOU4-type cellulose synthase CSC-interactive protein 0.03 Archaeplastida
LOC_Os04g51710.1 No alias SHOU4-type cellulose synthase CSC-interactive protein 0.05 Archaeplastida
LOC_Os08g13350.1 No alias SHOU4-type cellulose synthase CSC-interactive protein 0.04 Archaeplastida
MA_10432016g0010 No alias SHOU4-type cellulose synthase CSC-interactive protein 0.05 Archaeplastida
MA_9168g0010 No alias SHOU4-type cellulose synthase CSC-interactive protein 0.04 Archaeplastida
Pp3c12_5140V3.1 No alias Ubiquitin-specific protease family C19-related protein 0.06 Archaeplastida
Pp3c4_15790V3.1 No alias Ubiquitin-specific protease family C19-related protein 0.03 Archaeplastida
Solyc04g014680.4.1 No alias Uncharacterized membrane protein At1g16860... 0.07 Archaeplastida
Solyc12g017450.2.1 No alias SHOU4-type cellulose synthase CSC-interactive protein 0.06 Archaeplastida
Zm00001e007013_P001 No alias SHOU4-type cellulose synthase CSC-interactive protein 0.06 Archaeplastida
Zm00001e022289_P002 No alias SHOU4-type cellulose synthase CSC-interactive protein 0.1 Archaeplastida
Zm00001e040067_P002 No alias SHOU4-type cellulose synthase CSC-interactive protein 0.07 Archaeplastida
Zm00001e041596_P001 No alias SHOU4-type cellulose synthase CSC-interactive protein 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Neighborhood
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0003747 translation release factor activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007051 spindle organization IEP Neighborhood
MF GO:0008079 translation termination factor activity IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Neighborhood
BP GO:0051225 spindle assembly IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
BP GO:0070925 organelle assembly IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:1901135 carbohydrate derivative metabolic process IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!