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  5. AMTR_s00018p00252240

AMTR_s00018p00252240 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00018.162

Description : Probable L-gulonolactone oxidase 6 OS=Arabidopsis thaliana


Gene families : OG0000199 (Archaeplastida) Phylogenetic Tree(s): OG0000199_tree ,
OG_05_0000353 (LandPlants) Phylogenetic Tree(s): OG_05_0000353_tree ,
OG_06_0000853 (SeedPlants) Phylogenetic Tree(s): OG_06_0000853_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00018p00252240
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Gb_24045 No alias L-gulonolactone oxidase 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_24047 No alias Probable L-gulonolactone oxidase 6 OS=Arabidopsis... 0.03 Archaeplastida
MA_10430295g0020 No alias L-gulonolactone oxidase 5 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_123068g0010 No alias Probable L-gulonolactone oxidase 6 OS=Arabidopsis... 0.03 Archaeplastida
MA_39485g0010 No alias L-gulonolactone oxidase 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_47198g0010 No alias L-gulonolactone oxidase 5 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_7849212g0010 No alias Probable L-gulonolactone oxidase 1 OS=Arabidopsis... 0.03 Archaeplastida
Mp6g06140.1 No alias L-gulonolactone oxidase 5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e021853_P001 No alias L-gulonolactone oxidase 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEA Interproscan
MF GO:0008762 UDP-N-acetylmuramate dehydrogenase activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
MF GO:0050660 flavin adenine dinucleotide binding IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004190 aspartic-type endopeptidase activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Neighborhood
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
MF GO:0033897 ribonuclease T2 activity IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
MF GO:0070001 aspartic-type peptidase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR007173 ALO 396 527
IPR006094 Oxid_FAD_bind_N 59 190
No external refs found!