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  5. Smo439129

Smo439129


Description : Protein biosynthesis.organelle translation machineries.translation initiation.IF-3 initiation factor


Gene families : OG0001978 (Archaeplastida) Phylogenetic Tree(s): OG0001978_tree ,
OG_05_0007195 (LandPlants) Phylogenetic Tree(s): OG_05_0007195_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo439129
Cluster HCCA: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g01110.1 No alias IF-3 translation initiation factor 0.05 Archaeplastida
Pp3c16_14950V3.1 No alias translation initiation factor 3 (IF-3) family protein 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006413 translational initiation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005643 nuclear pore IEP Neighborhood
BP GO:0006354 DNA-templated transcription, elongation IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR019814 Translation_initiation_fac_3_N 99 168
No external refs found!