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  5. AMTR_s00018p00255530

AMTR_s00018p00255530 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00018.170

Description : Endoglucanase 1 OS=Persea americana


Gene families : OG0000093 (Archaeplastida) Phylogenetic Tree(s): OG0000093_tree ,
OG_05_0000198 (LandPlants) Phylogenetic Tree(s): OG_05_0000198_tree ,
OG_06_0000304 (SeedPlants) Phylogenetic Tree(s): OG_06_0000304_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00018p00255530
Cluster HCCA: Cluster_214

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00121890 evm_27.TU.AmTr_v1... Endoglucanase 17 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00010p00165730 evm_27.TU.AmTr_v1... Endoglucanase 8 OS=Arabidopsis thaliana 0.04 Archaeplastida
Pp3c22_22830V3.1 No alias glycosyl hydrolase 9A4 0.03 Archaeplastida
Zm00001e026066_P002 No alias Endoglucanase 2 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e026190_P002 No alias Endoglucanase 3 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e030964_P003 No alias Endoglucanase 17 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
CC GO:0005874 microtubule IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0007021 tubulin complex assembly IEP Neighborhood
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Neighborhood
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
MF GO:0033897 ribonuclease T2 activity IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
CC GO:0099080 supramolecular complex IEP Neighborhood
CC GO:0099081 supramolecular polymer IEP Neighborhood
CC GO:0099512 supramolecular fiber IEP Neighborhood
CC GO:0099513 polymeric cytoskeletal fiber IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001701 Glyco_hydro_9 59 479
No external refs found!