Smo439294


Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor


Gene families : OG0000067 (Archaeplastida) Phylogenetic Tree(s): OG0000067_tree ,
OG_05_0000426 (LandPlants) Phylogenetic Tree(s): OG_05_0000426_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo439294
Cluster HCCA: Cluster_139

Target Alias Description ECC score Gene Family Method Actions
AT1G70000 No alias myb-like transcription factor family protein 0.03 Archaeplastida
AT3G16350 No alias Homeodomain-like superfamily protein 0.01 Archaeplastida
GSVIVT01005816001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
LOC_Os01g04930.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
LOC_Os01g09640.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
LOC_Os01g41900.1 No alias transcription factor (MYB-related) 0.02 Archaeplastida
LOC_Os08g04840.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
LOC_Os08g05510.1 No alias transcription factor (MYB-related) 0.01 Archaeplastida
MA_79012g0010 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Mp5g11830.1 No alias transcription factor (MYB-related) 0.01 Archaeplastida
Pp3c4_17230V3.1 No alias Duplicated homeodomain-like superfamily protein 0.02 Archaeplastida
Zm00001e002313_P001 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Zm00001e017388_P001 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Zm00001e019254_P001 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Zm00001e037865_P001 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Zm00001e042486_P001 No alias transcription factor (MYB-related) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0004089 carbonate dehydratase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006721 terpenoid metabolic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016114 terpenoid biosynthetic process IEP Neighborhood
CC GO:0016459 myosin complex IEP Neighborhood
BP GO:0017006 protein-tetrapyrrole linkage IEP Neighborhood
BP GO:0017007 protein-bilin linkage IEP Neighborhood
BP GO:0017009 protein-phycocyanobilin linkage IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0071804 cellular potassium ion transport IEP Neighborhood
BP GO:0071805 potassium ion transmembrane transport IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 101 145
No external refs found!