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  5. Smo439584

Smo439584


No description available


Gene families : OG0003470 (Archaeplastida) Phylogenetic Tree(s): OG0003470_tree ,
OG_05_0006533 (LandPlants) Phylogenetic Tree(s): OG_05_0006533_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo439584
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00142p00090900 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AT2G25660 emb2410 embryo defective 2410 0.07 Archaeplastida
GSVIVT01035727001 No alias No description available 0.03 Archaeplastida
Gb_34395 No alias no description available(sp|w0ryd3|ssg4_orysj : 233.0) 0.04 Archaeplastida
Gb_34397 No alias no description available(sp|w0ryd3|ssg4_orysj : 250.0) 0.03 Archaeplastida
Gb_34400 No alias component Tic236 of inner envelope TIC translocation system 0.02 Archaeplastida
LOC_Os01g08420.1 No alias component Tic236 of inner envelope TIC translocation system 0.03 Archaeplastida
MA_10434122g0010 No alias component Tic236 of inner envelope TIC translocation system 0.02 Archaeplastida
MA_196707g0010 No alias no description available(sp|f4isl7|ti236_arath : 243.0) 0.02 Archaeplastida
MA_59214g0010 No alias no description available(sp|f4isl7|ti236_arath : 202.0) 0.02 Archaeplastida
Pp3c4_150V3.1 No alias embryo defective 2410 0.02 Archaeplastida
Solyc08g067860.2.1 No alias component Tic236 of inner envelope TIC translocation system 0.03 Archaeplastida
Solyc08g067870.2.1 No alias no description available(sp|f4isl7|ti236_arath : 953.0) 0.02 Archaeplastida
Zm00001e016691_P001 No alias component Tic236 of inner envelope TIC translocation system 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006914 autophagy IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
CC GO:0016459 myosin complex IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0061919 process utilizing autophagic mechanism IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR007452 TamB 1477 1830
No external refs found!