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Description : RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor
Gene families : OG0005280 (Archaeplastida) Phylogenetic Tree(s): OG0005280_tree ,
OG_05_0005894 (LandPlants) Phylogenetic Tree(s): OG_05_0005894_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo440228 | |
| Cluster | HCCA: Cluster_137 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00175p00051190 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.C3H zinc... | 0.02 | Archaeplastida | |
| Cre02.g101950 | No alias | RNA biosynthesis.transcriptional activation.C3H zinc... | 0.02 | Archaeplastida | |
| GSVIVT01025178001 | No alias | RNA biosynthesis.transcriptional activation.C3H zinc... | 0.02 | Archaeplastida | |
| LOC_Os04g01480.1 | No alias | C3H zinc finger transcription factor | 0.06 | Archaeplastida | |
| MA_10432089g0010 | No alias | Zinc finger CCCH domain-containing protein 24... | 0.02 | Archaeplastida | |
| Mp5g00110.1 | No alias | C3H zinc finger transcription factor | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008173 | RNA methyltransferase activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000049 | tRNA binding | IEP | Neighborhood |
| MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
| MF | GO:0003682 | chromatin binding | IEP | Neighborhood |
| MF | GO:0003723 | RNA binding | IEP | Neighborhood |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | Neighborhood |
| MF | GO:0003918 | DNA topoisomerase type II (ATP-hydrolyzing) activity | IEP | Neighborhood |
| MF | GO:0004175 | endopeptidase activity | IEP | Neighborhood |
| MF | GO:0004252 | serine-type endopeptidase activity | IEP | Neighborhood |
| MF | GO:0005338 | nucleotide-sugar transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005515 | protein binding | IEP | Neighborhood |
| MF | GO:0005524 | ATP binding | IEP | Neighborhood |
| CC | GO:0005737 | cytoplasm | IEP | Neighborhood |
| CC | GO:0005839 | proteasome core complex | IEP | Neighborhood |
| BP | GO:0006364 | rRNA processing | IEP | Neighborhood |
| MF | GO:0008094 | DNA-dependent ATPase activity | IEP | Neighborhood |
| MF | GO:0008144 | drug binding | IEP | Neighborhood |
| MF | GO:0008233 | peptidase activity | IEP | Neighborhood |
| MF | GO:0008236 | serine-type peptidase activity | IEP | Neighborhood |
| MF | GO:0008641 | ubiquitin-like modifier activating enzyme activity | IEP | Neighborhood |
| MF | GO:0015165 | pyrimidine nucleotide-sugar transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015932 | nucleobase-containing compound transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0016072 | rRNA metabolic process | IEP | Neighborhood |
| BP | GO:0016255 | attachment of GPI anchor to protein | IEP | Neighborhood |
| MF | GO:0016877 | ligase activity, forming carbon-sulfur bonds | IEP | Neighborhood |
| MF | GO:0016887 | ATPase activity | IEP | Neighborhood |
| MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
| MF | GO:0017171 | serine hydrolase activity | IEP | Neighborhood |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
| MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
| MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
| MF | GO:0042623 | ATPase activity, coupled | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043168 | anion binding | IEP | Neighborhood |
| CC | GO:0044424 | intracellular part | IEP | Neighborhood |
| CC | GO:0044464 | cell part | IEP | Neighborhood |
| MF | GO:0051082 | unfolded protein binding | IEP | Neighborhood |
| MF | GO:0061505 | DNA topoisomerase II activity | IEP | Neighborhood |
| MF | GO:0070011 | peptidase activity, acting on L-amino acid peptides | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| MF | GO:1901505 | carbohydrate derivative transmembrane transporter activity | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR010280 | U5_MeTrfase_fam | 403 | 571 |
| No external refs found! |