Smo440437

Description : Amino acid metabolism.degradation.gamma-aminobutyrate (GABA).gamma-hydroxybutyrate formation.bifunctional gamma-hydroxybutyrate dehydrogenase and glyoxylate reductase

Gene families : OG0002587 (Archaeplastida) Phylogenetic Tree(s): OG0002587_tree ,
OG_05_0003053 (LandPlants) Phylogenetic Tree(s): OG_05_0003053_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Smo440437
Cluster	HCCA: Cluster_32

Target	Alias	Description	ECC score	Gene Family Method
LOC_Os02g35500.1	No alias	bifunctional gamma-hydroxybutyrate dehydrogenase and...	0.02	Archaeplastida
Mp5g01840.1	No alias	bifunctional gamma-hydroxybutyrate dehydrogenase and...	0.02	Archaeplastida
Solyc03g121720.2.1	No alias	bifunctional gamma-hydroxybutyrate dehydrogenase and...	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0048037	cofactor binding	None	Extended
MF	GO:0050662	coenzyme binding	None	Extended
MF	GO:0051287	NAD binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0004418	hydroxymethylbilane synthase activity	IEP	Neighborhood
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Neighborhood
BP	GO:0006508	proteolysis	IEP	Neighborhood
BP	GO:0006790	sulfur compound metabolic process	IEP	Neighborhood
MF	GO:0008168	methyltransferase activity	IEP	Neighborhood
BP	GO:0009451	RNA modification	IEP	Neighborhood
BP	GO:0016226	iron-sulfur cluster assembly	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Neighborhood
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	Neighborhood
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Neighborhood
MF	GO:0019842	vitamin binding	IEP	Neighborhood
MF	GO:0030976	thiamine pyrophosphate binding	IEP	Neighborhood
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	Neighborhood
MF	GO:0043168	anion binding	IEP	Neighborhood
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	Neighborhood
MF	GO:0050661	NADP binding	IEP	Neighborhood
MF	GO:0071949	FAD binding	IEP	Neighborhood
MF	GO:1901681	sulfur compound binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR029154	NADP-bd	298	408

External Links

No external refs found!

Smo440437

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation