- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : Cell cycle.mitosis and meiosis.meiotic recombination.meiotic crossover.class I interference-sensitive crossover pathway.SHOC1-PTD heterodimer.PTD component
Gene families : OG0009066 (Archaeplastida) Phylogenetic Tree(s): OG0009066_tree ,
OG_05_0008834 (LandPlants) Phylogenetic Tree(s): OG_05_0008834_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo440438 | |
| Cluster | HCCA: Cluster_178 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Solyc06g064560.4.1 | No alias | component PTD of SHOC1-PTD heterodimer | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005575 | cellular_component | IEP | Neighborhood |
| CC | GO:0005622 | intracellular | IEP | Neighborhood |
| BP | GO:0006352 | DNA-templated transcription, initiation | IEP | Neighborhood |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Neighborhood |
| BP | GO:0006413 | translational initiation | IEP | Neighborhood |
| BP | GO:0006457 | protein folding | IEP | Neighborhood |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | Neighborhood |
| BP | GO:0009056 | catabolic process | IEP | Neighborhood |
| BP | GO:0009057 | macromolecule catabolic process | IEP | Neighborhood |
| BP | GO:0009987 | cellular process | IEP | Neighborhood |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | Neighborhood |
| CC | GO:0030008 | TRAPP complex | IEP | Neighborhood |
| BP | GO:0030258 | lipid modification | IEP | Neighborhood |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | Neighborhood |
| BP | GO:0044248 | cellular catabolic process | IEP | Neighborhood |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Neighborhood |
| CC | GO:0044464 | cell part | IEP | Neighborhood |
| BP | GO:0046834 | lipid phosphorylation | IEP | Neighborhood |
| BP | GO:0046854 | phosphatidylinositol phosphorylation | IEP | Neighborhood |
| MF | GO:0046983 | protein dimerization activity | IEP | Neighborhood |
| BP | GO:0051603 | proteolysis involved in cellular protein catabolic process | IEP | Neighborhood |
| CC | GO:0099023 | tethering complex | IEP | Neighborhood |
| BP | GO:1901575 | organic substance catabolic process | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |