Smo441012


Description : Vesicle trafficking.SNARE target membrane recognition and fusion complexes.Qc-type SNARE components.SYP5 group protein


Gene families : OG0002466 (Archaeplastida) Phylogenetic Tree(s): OG0002466_tree ,
OG_05_0002139 (LandPlants) Phylogenetic Tree(s): OG_05_0002139_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo441012
Cluster HCCA: Cluster_154

Target Alias Description ECC score Gene Family Method Actions
AT1G16230 No alias Target SNARE coiled-coil domain protein 0.02 Archaeplastida
AT1G79590 ATSYP52, SYP52 syntaxin of plants 52 0.02 Archaeplastida
GSVIVT01002017001 No alias Vesicle trafficking.SNARE target membrane recognition... 0.03 Archaeplastida
GSVIVT01004129001 No alias Vesicle trafficking.SNARE target membrane recognition... 0.02 Archaeplastida
LOC_Os02g02720.3 No alias SYP5 group Qc-type SNARE protein 0.02 Archaeplastida
Mp3g14430.1 No alias SYP5 group Qc-type SNARE protein 0.02 Archaeplastida
Pp3c7_22590V3.1 No alias syntaxin of plants 51 0.02 Archaeplastida
Solyc07g065030.3.1 No alias SYP5 group Qc-type SNARE protein 0.02 Archaeplastida
Solyc10g081060.2.1 No alias SYP5 group Qc-type SNARE protein 0.02 Archaeplastida
Zm00001e022242_P001 No alias SYP5 group Qc-type SNARE protein 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004190 aspartic-type endopeptidase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005048 signal sequence binding IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006612 protein targeting to membrane IEP Neighborhood
BP GO:0006613 cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0015988 energy coupled proton transmembrane transport, against electrochemical gradient IEP Neighborhood
BP GO:0015991 ATP hydrolysis coupled proton transport IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
MF GO:0042277 peptide binding IEP Neighborhood
BP GO:0045047 protein targeting to ER IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
MF GO:0046923 ER retention sequence binding IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0070001 aspartic-type peptidase activity IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0070972 protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0072657 protein localization to membrane IEP Neighborhood
BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood
BP GO:0090662 ATP hydrolysis coupled transmembrane transport IEP Neighborhood
BP GO:0099131 ATP hydrolysis coupled ion transmembrane transport IEP Neighborhood
BP GO:0099132 ATP hydrolysis coupled cation transmembrane transport IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1902600 proton transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR000727 T_SNARE_dom 169 220
No external refs found!