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  5. Smo442185

Smo442185


Description : RNA biosynthesis.transcriptional activation.NF-Y transcription factor complex.NF-YB component


Gene families : OG0000142 (Archaeplastida) Phylogenetic Tree(s): OG0000142_tree ,
OG_05_0000244 (LandPlants) Phylogenetic Tree(s): OG_05_0000244_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo442185
Cluster HCCA: Cluster_196

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00239530 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NF-Y... 0.02 Archaeplastida
Gb_00520 No alias component NF-YB of NF-Y transcription factor complex 0.03 Archaeplastida
Pp3c3_14260V3.1 No alias nuclear factor Y, subunit B3 0.02 Archaeplastida
Solyc01g067130.4.1 No alias component NF-YB of NF-Y transcription factor complex 0.01 Archaeplastida
Solyc12g006120.3.1 No alias component NF-YB of NF-Y transcription factor complex 0.01 Archaeplastida
Zm00001e001980_P001 No alias component NF-YB of NF-Y transcription factor complex 0.02 Archaeplastida
Zm00001e021676_P001 No alias component NF-YB of NF-Y transcription factor complex 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0008565 protein transporter activity IEP Neighborhood
BP GO:0010207 photosystem II assembly IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
BP GO:0045454 cell redox homeostasis IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
InterPro domains Description Start Stop
IPR003958 CBFA_NFYB_domain 32 96
No external refs found!