- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
No description available
Gene families : OG0004730 (Archaeplastida) Phylogenetic Tree(s): OG0004730_tree ,
OG_05_0007916 (LandPlants) Phylogenetic Tree(s): OG_05_0007916_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo442720 | |
| Cluster | HCCA: Cluster_84 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G26730 | No alias | RING/U-box superfamily protein | 0.04 | Archaeplastida | |
| GSVIVT01032990001 | No alias | No description available | 0.02 | Archaeplastida | |
| Gb_01733 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
| LOC_Os02g31150.1 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| MA_27283g0010 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| Mp3g06120.1 | No alias | no hits & (original description: none) | 0.01 | Archaeplastida | |
| Pp3c20_8910V3.1 | No alias | RING/U-box superfamily protein | 0.05 | Archaeplastida | |
| Solyc02g094510.4.1 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| Zm00001e014651_P001 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0046872 | metal ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004386 | helicase activity | IEP | Neighborhood |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Neighborhood |
| MF | GO:0005515 | protein binding | IEP | Neighborhood |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Neighborhood |
| MF | GO:0016462 | pyrophosphatase activity | IEP | Neighborhood |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Neighborhood |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Neighborhood |
| MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Neighborhood |
| MF | GO:0019239 | deaminase activity | IEP | Neighborhood |
| MF | GO:0019783 | ubiquitin-like protein-specific protease activity | IEP | Neighborhood |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Neighborhood |
| MF | GO:0036459 | thiol-dependent ubiquitinyl hydrolase activity | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR018957 | Znf_C3HC4_RING-type | 441 | 485 |
| No external refs found! |