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Description : RNA processing.RNA modification.dihydrouridylation.tRNA dihydrouridine synthase
Gene families : OG0004650 (Archaeplastida) Phylogenetic Tree(s): OG0004650_tree ,
OG_05_0005853 (LandPlants) Phylogenetic Tree(s): OG_05_0005853_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo443602 | |
| Cluster | HCCA: Cluster_108 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Zm00001e013257_P001 | No alias | tRNA dihydrouridine synthase | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000049 | tRNA binding | IEP | Neighborhood |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | Neighborhood |
| BP | GO:0006839 | mitochondrial transport | IEP | Neighborhood |
| BP | GO:0006886 | intracellular protein transport | IEP | Neighborhood |
| BP | GO:0008104 | protein localization | IEP | Neighborhood |
| BP | GO:0015031 | protein transport | IEP | Neighborhood |
| BP | GO:0015833 | peptide transport | IEP | Neighborhood |
| BP | GO:0017038 | protein import | IEP | Neighborhood |
| BP | GO:0019725 | cellular homeostasis | IEP | Neighborhood |
| BP | GO:0030150 | protein import into mitochondrial matrix | IEP | Neighborhood |
| BP | GO:0033036 | macromolecule localization | IEP | Neighborhood |
| BP | GO:0033365 | protein localization to organelle | IEP | Neighborhood |
| BP | GO:0034613 | cellular protein localization | IEP | Neighborhood |
| BP | GO:0042592 | homeostatic process | IEP | Neighborhood |
| BP | GO:0042886 | amide transport | IEP | Neighborhood |
| BP | GO:0044743 | protein transmembrane import into intracellular organelle | IEP | Neighborhood |
| BP | GO:0045184 | establishment of protein localization | IEP | Neighborhood |
| BP | GO:0045454 | cell redox homeostasis | IEP | Neighborhood |
| BP | GO:0046907 | intracellular transport | IEP | Neighborhood |
| BP | GO:0051641 | cellular localization | IEP | Neighborhood |
| BP | GO:0051649 | establishment of localization in cell | IEP | Neighborhood |
| BP | GO:0065002 | intracellular protein transmembrane transport | IEP | Neighborhood |
| BP | GO:0070585 | protein localization to mitochondrion | IEP | Neighborhood |
| BP | GO:0070727 | cellular macromolecule localization | IEP | Neighborhood |
| BP | GO:0071702 | organic substance transport | IEP | Neighborhood |
| BP | GO:0071705 | nitrogen compound transport | IEP | Neighborhood |
| BP | GO:0071806 | protein transmembrane transport | IEP | Neighborhood |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | Neighborhood |
| BP | GO:0072655 | establishment of protein localization to mitochondrion | IEP | Neighborhood |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Neighborhood |
| BP | GO:1990542 | mitochondrial transmembrane transport | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001269 | tRNA_hU_synthase | 55 | 345 |
| No external refs found! |