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  5. AMTR_s00019p00132110

AMTR_s00019p00132110 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00019.112

Description : Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-D-galacturonic acid synthesis.UDP-D-glucuronic acid 4-epimerase


Gene families : OG0000581 (Archaeplastida) Phylogenetic Tree(s): OG0000581_tree ,
OG_05_0000352 (LandPlants) Phylogenetic Tree(s): OG_05_0000352_tree ,
OG_06_0000363 (SeedPlants) Phylogenetic Tree(s): OG_06_0000363_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00019p00132110
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00257170 evm_27.TU.AmTr_v1... Carbohydrate metabolism.nucleotide sugar... 0.04 Archaeplastida
AT4G30440 GAE1 UDP-D-glucuronate 4-epimerase 1 0.04 Archaeplastida
Gb_19010 No alias UDP-D-glucuronic acid 4-epimerase 0.02 Archaeplastida
Gb_30802 No alias UDP-D-glucuronic acid 4-epimerase 0.03 Archaeplastida
LOC_Os08g41440.1 No alias UDP-D-glucuronic acid 4-epimerase 0.06 Archaeplastida
Mp2g22610.1 No alias UDP-D-glucuronic acid 4-epimerase 0.05 Archaeplastida
Pp3c4_21280V3.1 No alias UDP-D-glucuronate 4-epimerase 2 0.03 Archaeplastida
Pp3c7_19260V3.1 No alias UDP-D-glucuronate 4-epimerase 2 0.04 Archaeplastida
Solyc05g053790.1.1 No alias UDP-D-glucuronic acid 4-epimerase 0.04 Archaeplastida
Solyc10g018260.1.1 No alias UDP-D-glucuronic acid 4-epimerase 0.06 Archaeplastida
Zm00001e030744_P003 No alias UDP-D-glucuronic acid 4-epimerase 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
BP GO:0044237 cellular metabolic process IEA Interproscan
MF GO:0050662 coenzyme binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR001509 Epimerase_deHydtase 93 327
No external refs found!