Smo447947


Description : Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class III/Trithorax histone methyltransferase component


Gene families : OG0003953 (Archaeplastida) Phylogenetic Tree(s): OG0003953_tree ,
OG_05_0004003 (LandPlants) Phylogenetic Tree(s): OG_05_0004003_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo447947
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00043p00149000 evm_27.TU.AmTr_v1... Chromatin organisation.histone modifications.histone... 0.02 Archaeplastida
AT4G15180 SDG2, ATXR3 SET domain protein 2 0.09 Archaeplastida
GSVIVT01030649001 No alias Chromatin organisation.histone modifications.histone... 0.12 Archaeplastida
LOC_Os08g08210.1 No alias class III/Trithorax histone methyltransferase component... 0.09 Archaeplastida
MA_102811g0010 No alias class III/Trithorax histone methyltransferase component... 0.1 Archaeplastida
MA_102811g0020 No alias class III/Trithorax histone methyltransferase component... 0.07 Archaeplastida
Mp2g06500.1 No alias class III/Trithorax histone methyltransferase component... 0.1 Archaeplastida
Pp3c11_18840V3.1 No alias SET domain protein 2 0.08 Archaeplastida
Pp3c7_5920V3.1 No alias SET domain protein 2 0.03 Archaeplastida
Solyc07g052940.4.1 No alias class III/Trithorax histone methyltransferase component... 0.09 Archaeplastida
Zm00001e021659_P001 No alias class III/Trithorax histone methyltransferase component... 0.1 Archaeplastida
Zm00001e039942_P003 No alias class III/Trithorax histone methyltransferase component... 0.12 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0009235 cobalamin metabolic process IEP Neighborhood
BP GO:0009236 cobalamin biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0019239 deaminase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
MF GO:0035091 phosphatidylinositol binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001214 SET_dom 1457 1512
No external refs found!