AMTR_s00019p00163930 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00019.160

Description : RNA processing.RNA editing.adenosine deamination.TAD2-TAD3 tRNA adenosine deaminase complex.TAD3 component

Gene families : OG0005969 (Archaeplastida) Phylogenetic Tree(s): OG0005969_tree ,
OG_05_0007757 (LandPlants) Phylogenetic Tree(s): OG_05_0007757_tree ,
OG_06_0010004 (SeedPlants) Phylogenetic Tree(s): OG_06_0010004_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00019p00163930
Cluster	HCCA: Cluster_212

Target	Alias	Description	ECC score	Gene Family Method	Actions
AT5G24670	No alias	Cytidine/deoxycytidylate deaminase family protein	0.04	Archaeplastida
Zm00001e040563_P002	No alias	no hits & (original description: none)	0.07	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0016787	hydrolase activity	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
CC	GO:0005739	mitochondrion	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002125	CMP_dCMP_dom	148	370

External Links

No external refs found!